myRT

myRT report for GCA_002437205.1_ASM243720v1

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Seq: DJOP01000244.1 TPA_asm: Prevotella sp. UBA6435 UBA6435_contig_298, whole genome shotgun sequence (22129 bp)
Overview 1 RT 1: 75-4371 bp Neighborhood of RT #1 [75, 4371] DUF4376 RVT-DGRs Feature: gene Location: 75-530 bp Feature: gene Location: 535-1110 bp Feature: domain Description: DUF4376 Location: 772-1060 bp Feature: domain Description: DUF4376 Location: 772-1 060 bp Feature: gene Location: 1107-2879 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1752-2346 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 752-2346 bp Feature: gene Location: 3611-3760 bp Feature: gene Location: 3844-4371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4376 (pfam14301), RVT-DGRs

Seq: DJOP01000227.1 TPA_asm: Prevotella sp. UBA6435 UBA6435_contig_4284, whole genome shotgun sequence (9773 bp)
Overview 1 RT 1: 2039-9129 bp Neighborhood of RT #1 [2039, 9203] ADP_ribosyl_GH RVT-AbiP2 TPR_12 TPR_12 CHAT TPR TPR TPR Feature: gene Location: 2039-2272 bp Feature: gene Location: 2494-3447 bp Feature: domain Description: ADP_ribosyl_GH Location: 2533-3361 bp Feature: domain Description: ADP_ribosyl_GH Location: 2 533-3361 bp Feature: gene Location: 3464-5182 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3902-4358 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3902 -4358 bp Feature: gene Location: 5275-7836 bp Feature: domain Description: TPR_12 Location: 5518-5689 bp Feature: domain Description: TPR_12 Location: 5518-5689 bp Feature: domain Description: TPR_12 Location: 5899-6082 bp Feature: domain Description: TPR_12 Location: 5899-6082 bp Feature: domain Description: CHAT Location: 6826-7828 bp Feature: domain Description: CHAT Location: 682 6-782 8 bp Feature: gene Location: 7839-9203 bp Feature: domain Description: TPR Location: 8052-8355 bp Feature: domain Description: TPR Location: 8052 -8355 bp Feature: domain Description: TPR Location: 8574-8766 bp Feature: domain Description: TPR Location: 8574-8766 bp Feature: domain Description: TPR Location: 8811-9129 bp Feature: domain Description: TPR Location: 8811-912 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ADP_ribosyl_GH (pfam03747), RVT-AbiP2, TPR_12 (pfam13424), CHAT (pfam12770), TPR (smart00028)

Seq: DJOP01000176.1 TPA_asm: Prevotella sp. UBA6435 UBA6435_contig_6112, whole genome shotgun sequence (3193 bp)
Overview 1 RT 1: 1-3191 bp Neighborhood of RT #1 [1, 3191] COG4646 RVT-GII Intron_maturas2 Feature: gene Location: 1-591 bp Feature: domain Description: COG4646 Location: 106-553 bp Feature: domain Description: COG4646 Location: 106-553 bp Feature: gene Location: 578-2380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 842-1664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 842-1664 bp Feature: domain Description: Intron_maturas2 Location: 1823-2042 bp Feature: domain Description: Intron_maturas2 Location: 1823 -2042 bp Feature: gene Location: 3039-3191 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348)