myRT

myRT report for GCA_002439165.1_ASM243916v1

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Seq: DJTE01000040.1 TPA_asm: Chryseobacterium indologenes isolate UBA6316 UBA6316_contig_300, whole genome shotgun sequence (144577 bp)
Overview 1 RT 1: 112444-119375 bp Neighborhood of RT #1 [112444, 119422] Bac_Flav_CT_J DUF4141 RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G DUF4133 Feature: gene Location: 112444-113439 bp Feature: domain Description: Bac_Flav_CT_J Location: 112450-113416 bp Feature: domain Description: Bac_Flav_CT_J Location: 1 1 2450-1 1 341 6 bp Feature: gene Location: 113442-114074 bp Feature: domain Description: DUF4141 Location: 113457-113613 bp Feature: domain Description: DUF41 41 Location: 1 1 3457-1 1 361 3 bp Feature: gene Location: 114335-116209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114659-115481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 4659-1 1 5481 bp Feature: domain Description: Intron_maturas2 Location: 115610-115832 bp Feature: domain Description: Intron_maturas2 Location: 1 1 561 0-1 1 5832 bp Feature: domain Description: HNHc Note: nucleases Location: 116012-116180 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 601 2-1 1 61 80 bp Feature: gene Location: 116700-119093 bp Feature: domain Description: Bac_Flav_CT_G Location: 116703-119085 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 1 6703-1 1 9085 bp Feature: gene Location: 119090-119422 bp Feature: domain Description: DUF4133 Location: 119108-119375 bp Feature: domain Description: DUF41 33 Location: 1 1 91 08-1 1 9375 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_J (TIGR03782), DUF4141 (pfam13605), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_G (TIGR03783), DUF4133 (pfam13571)

Seq: DJTE01000038.1 TPA_asm: Chryseobacterium indologenes isolate UBA6316 UBA6316_contig_614, whole genome shotgun sequence (103745 bp)
Overview 1 RT 1: 84179-90687 bp Neighborhood of RT #1 [84179, 93260] AcrR RVT-UG2 TOPRIM_TopoIIB_SPO MukB Feature: gene Location: 84179-84775 bp Feature: domain Description: AcrR Location: 84197-84689 bp Feature: domain Description: AcrR Location: 84197-84689 bp Feature: gene Location: 85851-87038 bp Feature: gene Location: 87395-89011 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 87662-88607 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 87662 -88607 bp Feature: gene Location: 89058-90014 bp Feature: domain Description: TOPRIM_TopoIIB_SPO Location: 89667-89946 bp Feature: domain Description: TOPRIM_TopoIIB_SPO Location: 89667-89946 bp Feature: gene Location: 90018-93260 bp Feature: domain Description: MukB Location: 90108-90687 bp Feature: domain Description: MukB Location: 90108-90687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), RVT-UG2, TOPRIM_TopoIIB_SPO (cd00223), MukB (pfam04310)