myRT

myRT report for GCA_002440975.1_ASM244097v1

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Seq: DJWN01000126.1 TPA_asm: Bacteroidales bacterium UBA6229 UBA6229_contig_15209, whole genome shotgun sequence (86622 bp)
Overview 1 RT 1: 84134-86440 bp Neighborhood of RT #1 [84134, 86445] RVT-GII InsE TnpB_IS66 Feature: gene Location: 84134-84346 bp Feature: gene Location: 84482-84829 bp Feature: gene Location: 85063-85755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85429-85747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85429-85747 bp Feature: gene Location: 86004-86294 bp Feature: domain Description: InsE Location: 86040-86262 bp Feature: domain Description: InsE Location: 86040-86262 bp Feature: gene Location: 86296-86445 bp Feature: domain Description: TnpB_IS66 Location: 86323-86440 bp Feature: domain Description: TnpB_IS66 Location: 86323-86440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, InsE (COG2963), TnpB_IS66 (pfam05717)

Seq: DJWN01000130.1 TPA_asm: Bacteroidales bacterium UBA6229 UBA6229_contig_24309, whole genome shotgun sequence (35176 bp)
Overview 1 RT 1: 21113-26332 bp Neighborhood of RT #1 [21113, 26332] dinD ORF6N HsdM RVT-GII GIIM Feature: gene Location: 21113-22351 bp Feature: domain Description: dinD Location: 21134-21467 bp Feature: domain Description: dinD Location: 2 1134-2 1467 bp Feature: domain Description: ORF6N Location: 21509-21758 bp Feature: domain Description: ORF6N Location: 2 1509-2 1758 bp Feature: gene Location: 22355-23890 bp Feature: domain Description: HsdM Location: 22391-23879 bp Feature: domain Description: HsdM Location: 2 2 391-2 3879 bp Feature: gene Location: 24088-25353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24292-24952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 42 92 -2 4952 bp Feature: domain Description: GIIM Note: maturase Location: 25033-25252 bp Feature: domain Description: GIIM Note: maturase Location: 2 5033-2 52 52 bp Feature: gene Location: 25350-25535 bp Feature: gene Location: 26072-26332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dinD (PRK11525), ORF6N (pfam10543), HsdM (COG0286), RVT-GII, GIIM (pfam08388)

Seq: DJWN01000036.1 TPA_asm: Bacteroidales bacterium UBA6229 UBA6229_contig_79100, whole genome shotgun sequence (15424 bp)
Overview 1 RT 1: 12387-15230 bp Neighborhood of RT #1 [12387, 15421] Peptidase_C14 RVT-DGRs Feature: gene Location: 12387-14084 bp Feature: domain Description: Peptidase_C14 Location: 13329-14031 bp Feature: domain Description: Peptidase_C14 Location: 13 3 29-1403 1 bp Feature: gene Location: 14239-14388 bp Feature: gene Location: 14741-15421 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 14771-15230 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 14771-1523 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_C14 (pfam00656), RVT-DGRs