myRT

myRT report for GCA_002441045.1_ASM244104v1

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Seq: DJWQ01000074.1 TPA_asm: Firmicutes bacterium UBA6226 UBA6226_contig_111204, whole genome shotgun sequence (15950 bp)
Overview 1 RT 1: 10390-14777 bp Neighborhood of RT #1 [10390, 14896] HTH_AraC PanE RVT-GII GIIM AdoMet_MTases Feature: gene Location: 10390-11160 bp Feature: domain Description: HTH_AraC Location: 10888-10993 bp Feature: domain Description: HTH_AraC Location: 1 0888-1 0993 bp Feature: gene Location: 11424-12341 bp Feature: domain Description: PanE Location: 11427-12324 bp Feature: domain Description: PanE Location: 1 1 427-1 2324 bp Feature: gene Location: 12429-13847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12780-13398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2780-1 3398 bp Feature: domain Description: GIIM Note: maturase Location: 13452-13656 bp Feature: domain Description: GIIM Note: maturase Location: 1 3452-1 3656 bp Feature: gene Location: 13866-14069 bp Feature: gene Location: 14348-14896 bp Feature: domain Description: AdoMet_MTases Location: 14390-14777 bp Feature: domain Description: AdoMet_MTases Location: 1 4390-1 4777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_AraC (pfam00165), PanE (COG1893), RVT-GII, GIIM (pfam08388), AdoMet_MTases (cl17173)

Seq: DJWQ01000123.1 TPA_asm: Firmicutes bacterium UBA6226 UBA6226_contig_161368, whole genome shotgun sequence (3613 bp)
Overview 1 RT 1: 394-3605 bp Neighborhood of RT #1 [394, 3610] GIY-YIG RVT-UG13 proA Feature: gene Location: 394-945 bp Feature: domain Description: GIY-YIG Location: 472-658 bp Feature: domain Description: GIY-YIG Location: 472 -658 bp Feature: gene Location: 973-1149 bp Feature: gene Location: 1165-2985 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 1588-2056 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 1588-2 056 bp Feature: gene Location: 3428-3610 bp Feature: domain Description: proA Location: 3431-3605 bp Feature: domain Description: proA Location: 3431-3605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIY-YIG (pfam01541), RVT-UG13, proA (TIGR00407)

Seq: DJWQ01000061.1 TPA_asm: Firmicutes bacterium UBA6226 UBA6226_contig_91110, whole genome shotgun sequence (5056 bp)
Overview 1 RT 1: 760-4645 bp Neighborhood of RT #1 [760, 4647] UPF0547 INT_ICEBs1_C_like RVT-DGRs Phage_XkdX Feature: gene Location: 760-1998 bp Feature: domain Description: UPF0547 Location: 772-832 bp Feature: domain Description: UPF0547 Location: 772-83 2 bp Feature: domain Description: INT_ICEBs1_C_like Location: 1609-1951 bp Feature: domain Description: INT_ICEBs1_C_like Location: 1609-1951 bp Feature: gene Location: 2268-2603 bp Feature: gene Location: 2582-3811 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2777-3494 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2777-3 494 bp Feature: gene Location: 4016-4435 bp Feature: gene Location: 4507-4647 bp Feature: domain Description: Phage_XkdX Location: 4528-4645 bp Feature: domain Description: Phage_XkdX Location: 4528-4645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UPF0547 (pfam10571), INT_ICEBs1_C_like (cd01189), RVT-DGRs, Phage_XkdX (pfam09693)