myRT

myRT report for GCA_002441545.1_ASM244154v1

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Seq: DJWL01000175.1 TPA_asm: Flavobacteriaceae bacterium UBA6231 UBA6231_contig_102052, whole genome shotgun sequence (17516 bp)
Overview 1 RT 1: 1081-7906 bp Neighborhood of RT #1 [1081, 10206] HTH_17 AAA RVT-UG2 DUF3883 ResIII Feature: gene Location: 1081-1401 bp Feature: domain Description: HTH_17 Location: 1186-1321 bp Feature: domain Description: HTH_1 7 Location: 1 1 86-1 321 bp Feature: gene Location: 1560-3767 bp Feature: domain Description: AAA Location: 2148-2322 bp Feature: domain Description: AAA Location: 21 48-2322 bp Feature: gene Location: 3772-5310 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4027-4978 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4027-4978 bp Feature: gene Location: 6067-7017 bp Feature: domain Description: DUF3883 Location: 6724-6913 bp Feature: domain Description: DUF3883 Location: 6724-691 3 bp Feature: gene Location: 7030-10206 bp Feature: domain Description: ResIII Location: 7462-7906 bp Feature: domain Description: ResIII Location: 7462-7906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), AAA (TIGR00769), RVT-UG2, DUF3883 (pfam13020), ResIII (pfam04851)

Seq: DJWL01000124.1 TPA_asm: Flavobacteriaceae bacterium UBA6231 UBA6231_contig_53643, whole genome shotgun sequence (2578 bp)
Overview 1 RT 1: 2-2285 bp Neighborhood of RT #1 [2, 2575] Fib_succ_major RVT-CRISPR-like GIIM Feature: gene Location: 2-751 bp Feature: domain Description: Fib_succ_major Location: 227-743 bp Feature: domain Description: Fib_succ_major Location: 2 2 7-743 bp Feature: gene Location: 913-1620 bp Feature: gene Location: 1691-2575 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1766-1985 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1766-1985 bp Feature: domain Description: GIIM Note: maturase Location: 2069-2285 bp Feature: domain Description: GIIM Note: maturase Location: 2 069-2 2 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Fib_succ_major (TIGR02145), RVT-CRISPR, GIIM (pfam08388)

Seq: DJWL01000049.1 TPA_asm: Flavobacteriaceae bacterium UBA6231 UBA6231_contig_53644, whole genome shotgun sequence (2824 bp)
Overview 1 RT 1: 3-2531 bp Neighborhood of RT #1 [3, 2821] Fib_succ_major Fib_succ_major RVT-CRISPR-like GIIM Feature: gene Location: 3-1028 bp Feature: domain Description: Fib_succ_major Location: 15-195 bp Feature: domain Description: Fib_succ_major Location: 15-195 bp Feature: domain Description: Fib_succ_major Location: 504-1020 bp Feature: domain Description: Fib_succ_major Location: 504-1020 bp Feature: gene Location: 1190-1864 bp Feature: gene Location: 1937-2821 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2012-2231 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2012-223 1 bp Feature: domain Description: GIIM Note: maturase Location: 2315-2531 bp Feature: domain Description: GIIM Note: maturase Location: 23 15-253 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Fib_succ_major (TIGR02145), RVT-CRISPR, GIIM (pfam08388)