myRT

myRT report for GCA_002441995.1_ASM244199v1

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Seq: NXNS01000011.1 Escherichia coli strain 22_Esco_HA-NL 127748v_contig_11, whole genome shotgun sequence (231215 bp)
Overview 1 RT 1: 201000-204032 bp Neighborhood of RT #1 [201000, 204032] RVT-GII GIIM RVT-GII Feature: gene Location: 201000-201170 bp Feature: gene Location: 201308-201454 bp Feature: gene Location: 201553-202074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201559-201841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 559-201 841 bp Feature: domain Description: GIIM Note: maturase Location: 201889-202069 bp Feature: domain Description: GIIM Note: maturase Location: 201 889-202069 bp Feature: gene Location: 202102-202641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202432-202510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202432-20251 0 bp Feature: gene Location: 202672-202869 bp Feature: gene Location: 203127-204032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NXNS01000038.1 Escherichia coli strain 22_Esco_HA-NL 127748v_contig_38, whole genome shotgun sequence (137376 bp)
Overview 1 RT 1: 22309-28552 bp Neighborhood of RT #1 [22309, 28689] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 22309-22575 bp Feature: domain Description: Phage_integrase Location: 22375-22471 bp Feature: domain Description: Phage_integrase Location: 2 2 375-2 2 471 bp Feature: gene Location: 22658-23128 bp Feature: gene Location: 23475-26684 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24003-24492 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 4003-2 4492 bp Feature: domain Description: nitrilase Location: 25998-26595 bp Feature: domain Description: nitrilase Location: 2 5998-2 6595 bp Feature: gene Location: 26979-27782 bp Feature: domain Description: AbiEi_3_N Location: 27012-27273 bp Feature: domain Description: AbiEi_3_N Location: 2 7012 -2 72 73 bp Feature: domain Description: AbiEi_3 Location: 27285-27741 bp Feature: domain Description: AbiEi_3 Location: 2 72 85-2 7741 bp Feature: gene Location: 27769-28689 bp Feature: domain Description: AbiEii Location: 27811-28552 bp Feature: domain Description: AbiEii Location: 2 7811-2 8552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)