myRT

myRT report for GCA_002442155.1_ASM244215v1

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Seq: NXOE01000023.1 Escherichia coli strain 32_Esco_HA-NL 130781Q_contig_23, whole genome shotgun sequence (254667 bp)
Overview 1 RT 1: 1-5739 bp Neighborhood of RT #1 [1, 5741] Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Caudo_TAP RVT-Retrons TIR_2 PRK10597 prfC Feature: gene Location: 1-684 bp Feature: domain Description: Collar Location: 4-142 bp Feature: domain Description: Collar Location: 4-1 42 bp Feature: domain Description: Phage_fiber Location: 193-232 bp Feature: domain Description: Phage_fiber Location: 1 93-232 bp Feature: domain Description: Phage_fiber Location: 289-328 bp Feature: domain Description: Phage_fiber Location: 289-328 bp Feature: domain Description: Phage_fiber Location: 487-526 bp Feature: domain Description: Phage_fiber Location: 487-526 bp Feature: domain Description: Phage_fiber Location: 532-565 bp Feature: domain Description: Phage_fiber Location: 532-565 bp Feature: gene Location: 684-1268 bp Feature: domain Description: Caudo_TAP Location: 900-1257 bp Feature: domain Description: Caudo_TAP Location: 900-1 257 bp Feature: gene Location: 1713-3317 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2004-2595 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2004-2595 bp Feature: domain Description: TIR_2 Location: 2922-3255 bp Feature: domain Description: TIR_2 Location: 2922-3255 bp Feature: gene Location: 3675-3935 bp Feature: domain Description: PRK10597 Location: 3678-3918 bp Feature: domain Description: PRK1 0597 Location: 3678-391 8 bp Feature: gene Location: 4155-5741 bp Feature: domain Description: prfC Location: 4173-5739 bp Feature: domain Description: prfC Location: 41 73-5739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Collar (pfam07484), Phage_fiber (pfam03335), RVT-Retrons, TIR_2 (pfam13676), PRK10597 (DNA damage-inducible protein I; Provisional), prfC (TIGR00503), Caudo_TAP (pfam02413)