myRT

myRT report for GCA_002442395.1_ASM244239v1

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Seq: NXOU01000161.1 Escherichia coli strain 45_Esco_HA-DE 70228363_contig_161, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1 662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1 737-1 935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NXOU01000045.1 Escherichia coli strain 45_Esco_HA-DE 70228363_contig_45, whole genome shotgun sequence (163742 bp)
Overview 1 RT 1: 102860-108891 bp Neighborhood of RT #1 [102860, 108891] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 102860-103780 bp Feature: domain Description: AbiEii Location: 102902-103643 bp Feature: domain Description: AbiEii Location: 102 902 -103643 bp Feature: gene Location: 103767-104570 bp Feature: domain Description: AbiEi_3_N Location: 103800-104061 bp Feature: domain Description: AbiEi_3_N Location: 103800-104061 bp Feature: domain Description: AbiEi_3 Location: 104073-104529 bp Feature: domain Description: AbiEi_3 Location: 104073-10452 9 bp Feature: gene Location: 104865-108074 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 105393-105882 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 105393-105882 bp Feature: domain Description: nitrilase Location: 107388-107985 bp Feature: domain Description: nitrilase Location: 107388-107985 bp Feature: gene Location: 108235-108375 bp Feature: domain Description: Phage_ASH Location: 108262-108355 bp Feature: domain Description: Phage_ASH Location: 1082 62 -108355 bp Feature: gene Location: 108421-108891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)