myRT

myRT report for GCA_002444675.1_CFSAN049287

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Seq: NYGB01000004.1 Listeria monocytogenes strain CFSAN049287 CFSAN049287_contig_0000004, whole genome shotgun sequence (205010 bp)
Overview 1 RT 1: 106885-111767 bp Neighborhood of RT #1 [106885, 111767] DUF3852 RVT-GII Feature: gene Location: 106885-107241 bp Feature: domain Description: DUF3852 Location: 106909-107233 bp Feature: domain Description: DUF3852 Location: 1 06909-1 07233 bp Feature: gene Location: 107316-107738 bp Feature: gene Location: 107905-109794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108223-108928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 08223-1 08928 bp Feature: gene Location: 110171-110332 bp Feature: gene Location: 110511-111767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3852 (pfam12963), RVT-GII

Seq: NYGB01000009.1 Listeria monocytogenes strain CFSAN049287 CFSAN049287_contig_0000009, whole genome shotgun sequence (202245 bp)
Overview 1 RT 1: 8069-12145 bp Neighborhood of RT #1 [8069, 12147] YdeE PRK13316 RVT-AbiP2 Arsenite_oxidase RpmF Feature: gene Location: 8069-8548 bp Feature: domain Description: YdeE Location: 8072-8543 bp Feature: domain Description: YdeE Location: 8072 -8543 bp Feature: gene Location: 8583-9071 bp Feature: domain Description: PRK13316 Location: 8709-9069 bp Feature: domain Description: PRK13316 Location: 8709-9069 bp Feature: gene Location: 9338-11107 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 9791-10250 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 9791-102 50 bp Feature: gene Location: 11337-11912 bp Feature: domain Description: Arsenite_oxidase Location: 11349-11838 bp Feature: domain Description: Arsenite_oxidase Location: 11349-11838 bp Feature: gene Location: 11977-12147 bp Feature: domain Description: RpmF Location: 11980-12145 bp Feature: domain Description: RpmF Location: 11980-12 145 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdeE (COG3708), PRK13316 (heme oxygenase IsdG), RVT-AbiP2, Arsenite_oxidase, RpmF (COG0333)