myRT

myRT report for GCA_002445485.1_ASM244548v1

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Seq: NXPK01000001.1 Listeria monocytogenes strain CFSAN049209 CFSAN049209_contig_0000001, whole genome shotgun sequence (844220 bp)
Overview 1 RT 1: 252068-259870 bp Neighborhood of RT #1 [252068, 259899] COG4748 N6_Mtase YtxK RVT-Retrons DUF3130 DUF3958 Feature: gene Location: 252068-255016 bp Feature: domain Description: COG4748 Location: 252143-252542 bp Feature: domain Description: COG4748 Location: 2521 43-252542 bp Feature: domain Description: N6_Mtase Location: 253127-254051 bp Feature: domain Description: N6_Mtase Location: 2531 27-254051 bp Feature: gene Location: 255009-256616 bp Feature: domain Description: YtxK Location: 255039-256068 bp Feature: domain Description: YtxK Location: 255039-256068 bp Feature: gene Location: 257053-258780 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 257179-257779 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2571 79-257779 bp Feature: gene Location: 259258-259542 bp Feature: domain Description: DUF3130 Location: 259261-259528 bp Feature: domain Description: DUF31 30 Location: 259261 -259528 bp Feature: gene Location: 259543-259899 bp Feature: domain Description: DUF3958 Location: 259570-259870 bp Feature: domain Description: DUF3958 Location: 259570-259870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4748 (Uncharacterized protein, contains restriction enzyme R protein N terminal (HSDR_N) domain ), N6_Mtase (pfam02384), YtxK (COG0827), RVT-Retrons, DUF3130 (pfam11328), DUF3958 (pfam13125)