myRT

myRT report for GCA_002450605.1_ASM245060v1

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Seq: DJZW01000247.1 TPA_asm: Alteromonas australica isolate UBA6942 UBA6942_contig_16429, whole genome shotgun sequence (27647 bp)
Overview 1 RT 1: 11113-21025 bp Neighborhood of RT #1 [11113, 21201] DUF45 COG0610 RVT-UG5 YjgR YjgR SIR2_2 Feature: gene Location: 11113-11862 bp Feature: domain Description: DUF45 Location: 11221-11836 bp Feature: domain Description: DUF45 Location: 1 1 221 -1 1 836 bp Feature: gene Location: 11877-15158 bp Feature: domain Description: COG0610 Location: 11904-14997 bp Feature: domain Description: COG061 0 Location: 1 1 904-1 4997 bp Feature: gene Location: 15202-18144 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 15691-16147 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 5691 -1 61 47 bp Feature: gene Location: 18372-20114 bp Feature: domain Description: YjgR Location: 18822-19017 bp Feature: domain Description: YjgR Location: 1 8822-1 901 7 bp Feature: domain Description: YjgR Location: 19467-20046 bp Feature: domain Description: YjgR Location: 1 9467-20046 bp Feature: gene Location: 20116-21201 bp Feature: domain Description: SIR2_2 Location: 20530-21025 bp Feature: domain Description: SIR2_2 Location: 20530-21 025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF45 (pfam01863), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-UG5, YjgR (COG0433), SIR2_2 (pfam13289)

Seq: DJZW01000072.1 TPA_asm: Alteromonas australica isolate UBA6942 UBA6942_contig_5622, whole genome shotgun sequence (67082 bp)
Overview 1 RT 1: 2-4363 bp Neighborhood of RT #1 [2, 4467] RVT-UG8 RVT-UG3 M48C_Oma1_like SlyB Feature: gene Location: 2-1483 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 506-950 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 506-950 bp Feature: gene Location: 1473-2684 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1764-2229 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1764-2 2 2 9 bp Feature: gene Location: 2974-3771 bp Feature: domain Description: M48C_Oma1_like Location: 3181-3727 bp Feature: domain Description: M48C_Oma1_like Location: 3181-372 7 bp Feature: gene Location: 3979-4467 bp Feature: domain Description: SlyB Location: 4042-4363 bp Feature: domain Description: SlyB Location: 4042 -4363 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3, M48C_Oma1_like (cd07342), SlyB (COG3133)