myRT

myRT report for GCA_002451875.1_ASM245187v1

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Seq: DKDT01000172.1 TPA_asm: Bacteroidales bacterium UBA6841 UBA6841_contig_1324, whole genome shotgun sequence (35500 bp)
Overview 1 RT 1: 6375-10227 bp Neighborhood of RT #1 [6375, 10286] Arm-DNA-bind_5 VirD4 RVT-GII Intron_maturas2 HNHc HigB Feature: gene Location: 6375-6830 bp Feature: domain Description: Arm-DNA-bind_5 Location: 6402-6528 bp Feature: domain Description: Arm-DNA-bind_5 Location: 6402-6528 bp Feature: domain Description: VirD4 Location: 6528-6816 bp Feature: domain Description: VirD4 Location: 6528-681 6 bp Feature: gene Location: 7029-7259 bp Feature: gene Location: 7384-9195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7648-8470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7648-8470 bp Feature: domain Description: Intron_maturas2 Location: 8542-8842 bp Feature: domain Description: Intron_maturas2 Location: 8542-8842 bp Feature: domain Description: HNHc Note: nucleases Location: 8998-9169 bp Feature: domain Description: HNHc Note: nucleases Location: 8998-91 69 bp Feature: gene Location: 9182-9790 bp Feature: gene Location: 9966-10286 bp Feature: domain Description: HigB Location: 9984-10227 bp Feature: domain Description: HigB Location: 9984-1 0227 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), VirD4 (COG3505), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), HigB (COG4680)