myRT

myRT report for GCA_002452655.1_ASM245265v1

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Seq: DKEV01000096.1 TPA_asm: Firmicutes bacterium UBA6813 UBA6813_contig_37420, whole genome shotgun sequence (3653 bp)
Overview 1 RT 1: 288-3650 bp Neighborhood of RT #1 [288, 3650] HTH_32 DDE_3 RVT-GII GIIM RVT-GII Feature: gene Location: 288-1427 bp Feature: domain Description: HTH_32 Location: 474-735 bp Feature: domain Description: HTH_32 Location: 474-735 bp Feature: domain Description: DDE_3 Location: 897-1341 bp Feature: domain Description: DDE_3 Location: 897-1 341 bp Feature: gene Location: 1994-2605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2009-2219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2009-221 9 bp Feature: domain Description: GIIM Note: maturase Location: 2300-2531 bp Feature: domain Description: GIIM Note: maturase Location: 2300-2531 bp Feature: gene Location: 2596-3339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2893-3283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2893-3283 bp Feature: gene Location: 3480-3650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388)

Seq: DKEV01000176.1 TPA_asm: Firmicutes bacterium UBA6813 UBA6813_contig_41365, whole genome shotgun sequence (14997 bp)
Overview 1 RT 1: 10499-14379 bp Neighborhood of RT #1 [10499, 14379] RVT-UG7 TIR_2 Feature: gene Location: 10499-10867 bp Feature: gene Location: 10846-11145 bp Feature: gene Location: 11417-12967 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 11801-12224 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 11801-12 2 2 4 bp Feature: gene Location: 13159-14100 bp Feature: domain Description: TIR_2 Location: 13183-13477 bp Feature: domain Description: TIR_2 Location: 13183-13477 bp Feature: gene Location: 14158-14379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, TIR_2 (pfam13676)