myRT

myRT report for GCA_002453315.1_ASM245331v1

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Seq: DKGO01000143.1 TPA_asm: Bacillales bacterium UBA6768 UBA6768_contig_266, whole genome shotgun sequence (34993 bp)
Overview 1 RT 1: 26493-32314 bp Neighborhood of RT #1 [26493, 32328] RpoE HicB RVT-GII Intron_maturas2 HNHc RadC FolC Feature: gene Location: 26493-27095 bp Feature: domain Description: RpoE Location: 26604-27084 bp Feature: domain Description: RpoE Location: 26604-27084 bp Feature: gene Location: 27433-27618 bp Feature: domain Description: HicB Location: 27481-27598 bp Feature: domain Description: HicB Location: 27481 -27598 bp Feature: gene Location: 27855-29744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28125-28965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281 25-28965 bp Feature: domain Description: Intron_maturas2 Location: 29127-29340 bp Feature: domain Description: Intron_maturas2 Location: 291 27-29340 bp Feature: domain Description: HNHc Note: nucleases Location: 29535-29688 bp Feature: domain Description: HNHc Note: nucleases Location: 29535-29688 bp Feature: gene Location: 30290-30859 bp Feature: domain Description: RadC Location: 30314-30839 bp Feature: domain Description: RadC Location: 3031 4-30839 bp Feature: gene Location: 31027-32328 bp Feature: domain Description: FolC Location: 31075-32314 bp Feature: domain Description: FolC Location: 31 075-3231 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RpoE (COG3343), HicB (pfam05534), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RadC (pfam04002), FolC (COG0285)

Seq: DKGO01000090.1 TPA_asm: Bacillales bacterium UBA6768 UBA6768_contig_311, whole genome shotgun sequence (57100 bp)
Overview 1 RT 1: 20867-26483 bp Neighborhood of RT #1 [20867, 26483] DppD DppD RVT-GII Feature: gene Location: 20867-21073 bp Feature: gene Location: 21552-23537 bp Feature: domain Description: DppD Location: 21567-22494 bp Feature: domain Description: DppD Location: 2 1567-2 2 494 bp Feature: domain Description: DppD Location: 22626-23409 bp Feature: domain Description: DppD Location: 2 2 62 6-2 3409 bp Feature: gene Location: 24294-25205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24516-25134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4516-2 5134 bp Feature: gene Location: 25307-25582 bp Feature: gene Location: 25794-26483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DppD (COG0444), RVT-GII