myRT

myRT report for GCA_002454835.1_ASM245483v1

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Seq: DKJP01000017.1 TPA_asm: Ochrobactrum anthropi isolate UBA6689 UBA6689_contig_32, whole genome shotgun sequence (255464 bp)
Overview 1 RT 1: 125896-130472 bp Neighborhood of RT #1 [125896, 130472] HTH_XRE RVT-UG12 Feature: gene Location: 125896-126741 bp Feature: gene Location: 127011-127250 bp Feature: domain Description: HTH_XRE Location: 127032-127176 bp Feature: domain Description: HTH_XRE Location: 1 27032-1 271 76 bp Feature: gene Location: 127416-129089 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 127794-128232 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 1 27794-1 28232 bp Feature: gene Location: 129337-130212 bp Feature: gene Location: 130323-130472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-UG12

Seq: DKJP01000008.1 TPA_asm: Ochrobactrum anthropi isolate UBA6689 UBA6689_contig_63, whole genome shotgun sequence (23336 bp)
Overview 1 RT 1: 4017-7141 bp Neighborhood of RT #1 [4017, 7173] PHA02517 GIIM RVT-GII PHA02517 Feature: gene Location: 4017-4607 bp Feature: domain Description: PHA02517 Location: 4116-4605 bp Feature: domain Description: PHA02 517 Location: 4116-4605 bp Feature: gene Location: 4576-4965 bp Feature: domain Description: GIIM Note: maturase Location: 4579-4744 bp Feature: domain Description: GIIM Note: maturase Location: 4579-4744 bp Feature: gene Location: 5002-6105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5275-6010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 75-6010 bp Feature: gene Location: 6274-6480 bp Feature: gene Location: 6721-7173 bp Feature: domain Description: PHA02517 Location: 6787-7141 bp Feature: domain Description: PHA02 517 Location: 6787-7141 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), RVT-GII