myRT

myRT report for GCA_002455175.1_ASM245517v1

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Seq: DKKJ01000001.1 TPA_asm: Opitutaceae bacterium UBA6669 UBA6669_contig_1086, whole genome shotgun sequence (16749 bp)
Overview 1 RT 1: 78-1966 bp Neighborhood of RT #1 [78, 1966] RVT-GII GIIM Feature: gene Location: 78-1532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462-1080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462-1 080 bp Feature: domain Description: GIIM Note: maturase Location: 1131-1356 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 31 -1 356 bp Feature: gene Location: 1547-1705 bp Feature: gene Location: 1727-1966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: DKKJ01000022.1 TPA_asm: Opitutaceae bacterium UBA6669 UBA6669_contig_1874, whole genome shotgun sequence (8599 bp)
Overview 1 RT 1: 5352-8246 bp Neighborhood of RT #1 [5352, 8260] RVT-UG7 YiaG Feature: gene Location: 5352-5597 bp Feature: gene Location: 5622-6344 bp Feature: gene Location: 6341-7927 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 6779-7133 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 6779-7133 bp Feature: gene Location: 7970-8260 bp Feature: domain Description: YiaG Location: 8045-8246 bp Feature: domain Description: YiaG Location: 8045-82 46 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, YiaG (COG2944)

Seq: DKKJ01000058.1 TPA_asm: Opitutaceae bacterium UBA6669 UBA6669_contig_20520, whole genome shotgun sequence (6992 bp)
Overview 1 RT 1: 5633-6992 bp Neighborhood of RT #1 [5633, 6991] LZ_Tnp_IS66 RVT-GII Feature: gene Location: 5633-5917 bp Feature: domain Description: LZ_Tnp_IS66 Location: 5705-5870 bp Feature: domain Description: LZ_Tnp_IS66 Location: 5705-5870 bp Feature: gene Location: 5766-6476 bp Feature: gene Location: 6749-6991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6869-6992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6869-6992 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), RVT-GII

Seq: DKKJ01000157.1 TPA_asm: Opitutaceae bacterium UBA6669 UBA6669_contig_2631, whole genome shotgun sequence (7307 bp)
Overview 1 RT 1: 339-4802 bp Neighborhood of RT #1 [339, 4807] RVT_N RVT-GII RVT-GII GIIM FolA PRK13961 Feature: gene Location: 339-476 bp Feature: gene Location: 605-1423 bp Feature: domain Description: RVT_N Location: 818-1061 bp Feature: domain Description: RVT_N Location: 818-1061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1106-1421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1106-14 21 bp Feature: gene Location: 1479-2243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1521-1725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1521-1725 bp Feature: domain Description: GIIM Note: maturase Location: 1779-2010 bp Feature: domain Description: GIIM Note: maturase Location: 1779-2010 bp Feature: gene Location: 2432-3124 bp Feature: domain Description: FolA Location: 2585-3038 bp Feature: domain Description: FolA Location: 2585-3038 bp Feature: gene Location: 3896-4807 bp Feature: domain Description: PRK13961 Location: 3962-4802 bp Feature: domain Description: PRK13961 Location: 3962-4 802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), FolA (COG0262), PRK13961 (phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional)

Seq: DKKJ01000377.1 TPA_asm: Opitutaceae bacterium UBA6669 UBA6669_contig_3967, whole genome shotgun sequence (23955 bp)
Overview 1 RT 1: 21578-23690 bp Neighborhood of RT #1 [21578, 23863] RVT-GII GIIM Feature: gene Location: 21578-22087 bp Feature: gene Location: 22255-22506 bp Feature: gene Location: 22616-23863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22823-23441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22823-23441 bp Feature: domain Description: GIIM Note: maturase Location: 23489-23690 bp Feature: domain Description: GIIM Note: maturase Location: 23489-23690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: DKKJ01000062.1 TPA_asm: Opitutaceae bacterium UBA6669 UBA6669_contig_7480, whole genome shotgun sequence (52094 bp)
Overview 1 RT 1: 16547-20589 bp Neighborhood of RT #1 [16547, 20621] RVT-GII GIIM Sialidase_non-viral Sialidase_non-viral Feature: gene Location: 16547-16768 bp Feature: gene Location: 16874-17239 bp Feature: gene Location: 17822-18391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17825-18158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17825-18158 bp Feature: domain Description: GIIM Note: maturase Location: 18254-18389 bp Feature: domain Description: GIIM Note: maturase Location: 18254-18389 bp Feature: gene Location: 18849-19766 bp Feature: domain Description: Sialidase_non-viral Location: 18858-19716 bp Feature: domain Description: Sialidase_non-viral Location: 18858-19716 bp Feature: gene Location: 20007-20621 bp Feature: domain Description: Sialidase_non-viral Location: 20070-20589 bp Feature: domain Description: Sialidase_non-viral Location: 20070-20589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Sialidase_non-viral (cd15482)

Seq: DKKJ01000100.1 TPA_asm: Opitutaceae bacterium UBA6669 UBA6669_contig_9596, whole genome shotgun sequence (24196 bp)
Overview 1 RT 1: 2808-6248 bp Neighborhood of RT #1 [2808, 6248] RVT-GII Feature: gene Location: 2808-3209 bp Feature: gene Location: 3269-3502 bp Feature: gene Location: 3480-4589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3819-4476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3819-447 6 bp Feature: gene Location: 4753-5838 bp Feature: gene Location: 5805-6248 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII