myRT

myRT report for GCA_002456245.1_ASM245624v1

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Seq: NKDE01000034.1 Escherichia coli strain MOD1-EC910 MOD1-EC910_34_length_50883_cov_36.7016, whole genome shotgun sequence (50883 bp)
Overview 1 RT 1: 44508-48738 bp Neighborhood of RT #1 [44508, 48740] PBP2_CrgA_like_5 RVT-Retrons COG3680 Feature: gene Location: 44508-44918 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 44580-44892 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 44580-44892 bp Feature: gene Location: 45180-45308 bp Feature: gene Location: 45420-47255 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 45555-46251 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 45555-46251 bp Feature: gene Location: 47456-47629 bp Feature: gene Location: 47967-48740 bp Feature: domain Description: COG3680 Location: 47970-48738 bp Feature: domain Description: COG3680 Location: 47970-48738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_CrgA_like_5 (cd08474), RVT-Retrons, COG3680 (Uncharacterized protein )

Seq: NKDE01000074.1 Escherichia coli strain MOD1-EC910 MOD1-EC910_74_length_7767_cov_30.6726, whole genome shotgun sequence (7767 bp)
Overview 1 RT 1: 4751-7216 bp Neighborhood of RT #1 [4751, 7314] RVT-GII GIIM RAYT Feature: gene Location: 4751-4888 bp Feature: gene Location: 4978-5250 bp Feature: gene Location: 5275-6621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5563-6181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5563-6181 bp Feature: domain Description: GIIM Note: maturase Location: 6229-6460 bp Feature: domain Description: GIIM Note: maturase Location: 62 2 9-6460 bp Feature: gene Location: 6775-7314 bp Feature: domain Description: RAYT Location: 6853-7216 bp Feature: domain Description: RAYT Location: 6853-72 16 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RAYT (COG1943)