myRT

myRT report for GCA_002456505.1_ASM245650v1

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Seq: NKDS01000037.1 Escherichia coli strain MOD1-EC688 MOD1-EC688_37_length_44564_cov_44.999, whole genome shotgun sequence (44564 bp)
Overview 1 RT 1: 3-4400 bp Neighborhood of RT #1 [3, 4498] RhsA RVT-GII group_II_RT_mat YhhI YhhI YhhI Feature: gene Location: 3-818 bp Feature: domain Description: RhsA Location: 18-384 bp Feature: domain Description: RhsA Location: 1 8-384 bp Feature: gene Location: 1183-1410 bp Feature: gene Location: 1661-2740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2132-2723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 32-2723 bp Feature: gene Location: 2762-3013 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2768-2996 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2768-2996 bp Feature: gene Location: 3377-4498 bp Feature: domain Description: YhhI Location: 3383-3728 bp Feature: domain Description: YhhI Location: 3383-3728 bp Feature: domain Description: YhhI Location: 3785-4139 bp Feature: domain Description: YhhI Location: 3785-41 39 bp Feature: domain Description: YhhI Location: 4157-4400 bp Feature: domain Description: YhhI Location: 41 57-4400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), YhhI (COG5433), RhsA (COG3209)

Seq: NKDS01000007.1 Escherichia coli strain MOD1-EC688 MOD1-EC688_7_length_151961_cov_43.3094, whole genome shotgun sequence (151961 bp)
Overview 1 RT 1: 99007-102863 bp Neighborhood of RT #1 [99007, 102863] PRK15452 GIIM RVT-GII Feature: gene Location: 99007-100368 bp Feature: domain Description: PRK15452 Location: 99010-100333 bp Feature: domain Description: PRK15452 Location: 99010-100333 bp Feature: gene Location: 100678-101190 bp Feature: domain Description: GIIM Note: maturase Location: 100798-101029 bp Feature: domain Description: GIIM Note: maturase Location: 100798-10102 9 bp Feature: gene Location: 101293-102066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101623-102058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10162 3-102 058 bp Feature: gene Location: 102294-102590 bp Feature: gene Location: 102654-102863 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, PRK15452 (putative protease; Provisional)