myRT

myRT report for GCA_002456515.1_ASM245651v1

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Seq: NKDU01000024.1 Escherichia coli strain MOD1-EC684 MOD1-EC684_24_length_65675_cov_38.5532, whole genome shotgun sequence (65675 bp)
Overview 1 RT 1: 52016-55898 bp Neighborhood of RT #1 [52016, 55903] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 52016-52732 bp Feature: domain Description: rph Location: 52019-52727 bp Feature: domain Description: rph Location: 5201 9-52727 bp Feature: gene Location: 52783-53439 bp Feature: domain Description: pyrE Location: 52801-53434 bp Feature: domain Description: pyrE Location: 52801 -53434 bp Feature: gene Location: 53737-54696 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 53872-54421 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 53872-54421 bp Feature: gene Location: 54742-55338 bp Feature: domain Description: slmA Location: 54748-55324 bp Feature: domain Description: slmA Location: 54748-55324 bp Feature: gene Location: 55445-55903 bp Feature: domain Description: dut Location: 55451-55898 bp Feature: domain Description: dut Location: 55451 -55898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: NKDU01000081.1 Escherichia coli strain MOD1-EC684 MOD1-EC684_81_length_3243_cov_31.4602, whole genome shotgun sequence (3243 bp)
Overview 1 RT 1: 3-3014 bp Neighborhood of RT #1 [3, 3241] SLATT_5 RVT-UG17 Peptidase_S74 Feature: gene Location: 3-188 bp Feature: gene Location: 299-850 bp Feature: domain Description: SLATT_5 Location: 305-821 bp Feature: domain Description: SLATT_5 Location: 305-82 1 bp Feature: gene Location: 828-2198 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1056-1662 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1056-1662 bp Feature: gene Location: 2279-2611 bp Feature: gene Location: 2636-3241 bp Feature: domain Description: Peptidase_S74 Location: 2867-3014 bp Feature: domain Description: Peptidase_S74 Location: 2 867-3014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Peptidase_S74 (pfam13884)