myRT

myRT report for GCA_002456745.1_ASM245674v1

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Seq: NKEG01000001.1 Escherichia coli strain MOD1-EC585 MOD1-EC585_1_length_957620_cov_41.1775, whole genome shotgun sequence (957620 bp)
Overview 1 RT 1: 232690-238917 bp Neighborhood of RT #1 [232690, 238917] ABC_Iron-Siderophores_B12_Hemin ABC_Iron-Siderophores_B12_Hemin RVT-Retrons SMC_N Feature: gene Location: 232690-232965 bp Feature: gene Location: 233033-234355 bp Feature: domain Description: ABC_Iron-Siderophores_B12_Hemin Location: 233069-233189 bp Feature: domain Description: ABC_Iron-Siderophores_B1 2_Hemin Location: 233069-2331 89 bp Feature: domain Description: ABC_Iron-Siderophores_B12_Hemin Location: 233579-233771 bp Feature: domain Description: ABC_Iron-Siderophores_B1 2_Hemin Location: 233579-233771 bp Feature: gene Location: 234357-235304 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 234468-235038 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 234468-235038 bp Feature: gene Location: 235947-238268 bp Feature: domain Description: SMC_N Location: 235965-238188 bp Feature: domain Description: SMC_N Location: 235965-2381 88 bp Feature: gene Location: 238231-238917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_Iron-Siderophores_B12_Hemin (cd03214), RVT-Retrons, SMC_N (pfam02463)

Seq: NKEG01000008.1 Escherichia coli strain MOD1-EC585 MOD1-EC585_8_length_232181_cov_48.5886, whole genome shotgun sequence (232181 bp)
Overview 1 RT 1: 179755-185500 bp Neighborhood of RT #1 [179755, 185880] PRK10438 YhhI YhhI YhhI RVT-GII GIIM RhsA RhsA Feature: gene Location: 179755-180525 bp Feature: domain Description: PRK10438 Location: 179758-180520 bp Feature: domain Description: PRK10438 Location: 179758-18052 0 bp Feature: gene Location: 180566-181639 bp Feature: domain Description: YhhI Location: 180569-180869 bp Feature: domain Description: YhhI Location: 180569-180869 bp Feature: domain Description: YhhI Location: 180926-181280 bp Feature: domain Description: YhhI Location: 18092 6-1812 80 bp Feature: domain Description: YhhI Location: 181295-181541 bp Feature: domain Description: YhhI Location: 1812 95-181541 bp Feature: gene Location: 181910-183409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182363-183020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182 363-18302 0 bp Feature: domain Description: GIIM Note: maturase Location: 183110-183314 bp Feature: domain Description: GIIM Note: maturase Location: 183110-183314 bp Feature: gene Location: 183860-184327 bp Feature: gene Location: 184324-185880 bp Feature: domain Description: RhsA Location: 184342-184591 bp Feature: domain Description: RhsA Location: 184342 -184591 bp Feature: domain Description: RhsA Location: 184711-185500 bp Feature: domain Description: RhsA Location: 184711-185500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10438 (C-N hydrolase family amidase; Provisional), YhhI (COG5433), RVT-GII, GIIM (pfam08388), RhsA (COG3209)