myRT

myRT report for GCA_002460165.1_ASM246016v1

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Seq: NKOX01000030.1 Escherichia coli strain MOD1-EC1644 MOD1-EC1644_30_length_56247_cov_41.4831, whole genome shotgun sequence (56247 bp)
Overview 1 RT 1: 39869-43682 bp Neighborhood of RT #1 [39869, 43687] RVT-Retrons Q Feature: gene Location: 39869-40204 bp Feature: gene Location: 40476-40619 bp Feature: gene Location: 40850-42352 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40994-41615 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40994-41 61 5 bp Feature: gene Location: 42385-42606 bp Feature: gene Location: 42656-43687 bp Feature: domain Description: Q Location: 42659-43682 bp Feature: domain Description: Q Location: 42659-43682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Q (PHA02536)

Seq: NKOX01000041.1 Escherichia coli strain MOD1-EC1644 MOD1-EC1644_41_length_41248_cov_41.1043, whole genome shotgun sequence (41248 bp)
Overview 1 RT 1: 35538-40065 bp Neighborhood of RT #1 [35538, 40065] PRK15047 RutF RVT-GII GIIM Feature: gene Location: 35538-36383 bp Feature: domain Description: PRK15047 Location: 35541-36381 bp Feature: domain Description: PRK15047 Location: 35541-36381 bp Feature: gene Location: 36558-37127 bp Feature: domain Description: RutF Location: 36612-37116 bp Feature: domain Description: RutF Location: 36612 -37116 bp Feature: gene Location: 37422-38921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37875-38532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37875-38532 bp Feature: domain Description: GIIM Note: maturase Location: 38616-38826 bp Feature: domain Description: GIIM Note: maturase Location: 38616-3882 6 bp Feature: gene Location: 39270-39644 bp Feature: gene Location: 39865-40065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15047 (N-hydroxyarylamine O-acetyltransferase; Provisional), RutF (TIGR03615), RVT-GII, GIIM (pfam08388)