myRT

myRT report for GCA_002460475.1_ASM246047v1

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Seq: NKOP01000022.1 Escherichia coli strain MOD1-EC1690 MOD1-EC1690_22_length_82858_cov_46.6934, whole genome shotgun sequence (82858 bp)
Overview 1 RT 1: 60274-66517 bp Neighborhood of RT #1 [60274, 66654] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 60274-60540 bp Feature: domain Description: Phage_integrase Location: 60340-60436 bp Feature: domain Description: Phage_integrase Location: 60340-60436 bp Feature: gene Location: 60623-61093 bp Feature: gene Location: 61440-64649 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 61968-62457 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 61 968-62457 bp Feature: domain Description: nitrilase Location: 63963-64560 bp Feature: domain Description: nitrilase Location: 63963-64560 bp Feature: gene Location: 64944-65747 bp Feature: domain Description: AbiEi_3_N Location: 64977-65238 bp Feature: domain Description: AbiEi_3_N Location: 64977-65238 bp Feature: domain Description: AbiEi_3 Location: 65250-65706 bp Feature: domain Description: AbiEi_3 Location: 65250-65706 bp Feature: gene Location: 65734-66654 bp Feature: domain Description: AbiEii Location: 65776-66517 bp Feature: domain Description: AbiEii Location: 65776-6651 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: NKOP01000056.1 Escherichia coli strain MOD1-EC1690 MOD1-EC1690_56_length_24158_cov_47.1189, whole genome shotgun sequence (24158 bp)
Overview 1 RT 1: 15296-18517 bp Neighborhood of RT #1 [15296, 18525] group_II_RT_mat RVT-GII RVT-GII GIIM YesM Feature: gene Location: 15296-15487 bp Feature: gene Location: 15644-15976 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 15806-15968 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 15806-15968 bp Feature: gene Location: 15973-16164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15976-16033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15976-16033 bp Feature: gene Location: 16192-16713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16198-16480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16198-16480 bp Feature: domain Description: GIIM Note: maturase Location: 16528-16708 bp Feature: domain Description: GIIM Note: maturase Location: 1652 8-16708 bp Feature: gene Location: 17035-17223 bp Feature: gene Location: 17263-18525 bp Feature: domain Description: YesM Location: 17776-18517 bp Feature: domain Description: YesM Location: 17776-18517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388), YesM (COG2972)