myRT

myRT report for GCA_002461385.1_ASM246138v1

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Seq: NJVZ01000039.1 Escherichia coli strain MOD1-EC1510 MOD1-EC1510_39_length_41257_cov_45.7611, whole genome shotgun sequence (41257 bp)
Overview 1 RT 1: 35547-40074 bp Neighborhood of RT #1 [35547, 40074] PRK15047 RutF RVT-GII GIIM Feature: gene Location: 35547-36392 bp Feature: domain Description: PRK15047 Location: 35550-36390 bp Feature: domain Description: PRK1 5047 Location: 35550-36390 bp Feature: gene Location: 36567-37136 bp Feature: domain Description: RutF Location: 36621-37125 bp Feature: domain Description: RutF Location: 36621 -371 25 bp Feature: gene Location: 37431-38930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37884-38541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37884-38541 bp Feature: domain Description: GIIM Note: maturase Location: 38625-38835 bp Feature: domain Description: GIIM Note: maturase Location: 38625-38835 bp Feature: gene Location: 39279-39653 bp Feature: gene Location: 39874-40074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15047 (N-hydroxyarylamine O-acetyltransferase; Provisional), RutF (TIGR03615), RVT-GII, GIIM (pfam08388)

Seq: NJVZ01000004.1 Escherichia coli strain MOD1-EC1510 MOD1-EC1510_4_length_221052_cov_44.9934, whole genome shotgun sequence (221052 bp)
Overview 1 RT 1: 177366-181605 bp Neighborhood of RT #1 [177366, 181610] Q RVT-Retrons DinI Feature: gene Location: 177366-178397 bp Feature: domain Description: Q Location: 177369-178392 bp Feature: domain Description: Q Location: 177369-178392 bp Feature: gene Location: 178447-178668 bp Feature: gene Location: 178701-180203 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 178845-179466 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 178845-179466 bp Feature: gene Location: 180849-181184 bp Feature: gene Location: 181377-181610 bp Feature: domain Description: DinI Location: 181419-181605 bp Feature: domain Description: DinI Location: 181419-181605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-Retrons, DinI (pfam06183)