myRT

myRT report for GCA_002461645.1_ASM246164v1

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Seq: NKAF01000033.1 Escherichia coli strain MOD1-EC1392 MOD1-EC1392_33_length_51073_cov_51.0093, whole genome shotgun sequence (51037 bp)
Overview 1 RT 1: 38135-42014 bp Neighborhood of RT #1 [38135, 42019] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 38135-38851 bp Feature: domain Description: rph Location: 38138-38846 bp Feature: domain Description: rph Location: 381 38-38846 bp Feature: gene Location: 38902-39558 bp Feature: domain Description: pyrE Location: 38920-39553 bp Feature: domain Description: pyrE Location: 38920-39553 bp Feature: gene Location: 39855-40814 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39990-40539 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39990-40539 bp Feature: gene Location: 40858-41454 bp Feature: domain Description: slmA Location: 40864-41440 bp Feature: domain Description: slmA Location: 40864-41 440 bp Feature: gene Location: 41561-42019 bp Feature: domain Description: dut Location: 41567-42014 bp Feature: domain Description: dut Location: 41 567-4201 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: NKAF01000057.1 Escherichia coli strain MOD1-EC1392 MOD1-EC1392_57_length_19721_cov_54.3525, whole genome shotgun sequence (19721 bp)
Overview 1 RT 1: 15151-19272 bp Neighborhood of RT #1 [15151, 19272] TIGR02646 COG3950 RVT-Retrons Feature: gene Location: 15151-15801 bp Feature: domain Description: TIGR02646 Location: 15217-15616 bp Feature: domain Description: TIGR02 646 Location: 152 17-15616 bp Feature: gene Location: 15804-17456 bp Feature: domain Description: COG3950 Location: 16002-17418 bp Feature: domain Description: COG3950 Location: 16002 -17418 bp Feature: gene Location: 17453-18388 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17555-18155 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17555-18155 bp Feature: gene Location: 18403-18537 bp Feature: gene Location: 18811-19272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons