myRT

myRT report for GCA_002462935.1_ASM246293v1

Download annotations/find similar RTs

Seq: NTNF01000018.1 Escherichia coli strain MOD1-EC6551 MOD1-EC6551_18_length_89485_cov_44.3495, whole genome shotgun sequence (89485 bp)
Overview 1 RT 1: 802-6246 bp Neighborhood of RT #1 [802, 6246] RVT-UG5 nitrilase PRK09692 Feature: gene Location: 802-936 bp Feature: gene Location: 990-1679 bp Feature: gene Location: 1676-4561 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2153-2684 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 21 53-2684 bp Feature: domain Description: nitrilase Location: 3854-4487 bp Feature: domain Description: nitrilase Location: 3854-4487 bp Feature: gene Location: 4627-5877 bp Feature: domain Description: PRK09692 Location: 4636-5836 bp Feature: domain Description: PRK09692 Location: 4636-5836 bp Feature: gene Location: 6022-6246 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424), PRK09692 (Integrase; provisional)

Seq: NTNF01000093.1 Escherichia coli strain MOD1-EC6551 MOD1-EC6551_93_length_4635_cov_65.2108, whole genome shotgun sequence (4635 bp)
Overview 1 RT 1: 442-3464 bp Neighborhood of RT #1 [442, 4498] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 Feature: gene Location: 442-1362 bp Feature: domain Description: AbiEii Location: 484-1225 bp Feature: domain Description: AbiEii Location: 484-12 2 5 bp Feature: gene Location: 1349-2152 bp Feature: domain Description: AbiEi_3_N Location: 1382-1643 bp Feature: domain Description: AbiEi_3_N Location: 1382 -1643 bp Feature: domain Description: AbiEi_3 Location: 1655-2111 bp Feature: domain Description: AbiEi_3 Location: 1655-2 111 bp Feature: gene Location: 2447-4498 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2975-3464 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 975-3464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5