myRT

myRT report for GCA_002463155.1_ASM246315v1

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Seq: NTNU01000011.1 Escherichia coli strain MOD1-EC6250 MOD1-EC6250_11_length_184137_cov_50.8538, whole genome shotgun sequence (184137 bp)
Overview 1 RT 1: 49333-53214 bp Neighborhood of RT #1 [49333, 53219] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 49333-49791 bp Feature: domain Description: dut Location: 49339-49786 bp Feature: domain Description: dut Location: 49339-49786 bp Feature: gene Location: 49898-50494 bp Feature: domain Description: slmA Location: 49904-50480 bp Feature: domain Description: slmA Location: 49904-50480 bp Feature: gene Location: 50540-51499 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50675-51224 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50675-51 224 bp Feature: gene Location: 51797-52453 bp Feature: domain Description: pyrE Location: 51815-52448 bp Feature: domain Description: pyrE Location: 51 81 5-52448 bp Feature: gene Location: 52503-53219 bp Feature: domain Description: rph Location: 52506-53214 bp Feature: domain Description: rph Location: 52506-5321 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: NTNU01000062.1 Escherichia coli strain MOD1-EC6250 MOD1-EC6250_62_length_3243_cov_50.3054, whole genome shotgun sequence (3243 bp)
Overview 1 RT 1: 3-3014 bp Neighborhood of RT #1 [3, 3241] SLATT_5 RVT-UG17 Peptidase_S74 Feature: gene Location: 3-188 bp Feature: gene Location: 299-850 bp Feature: domain Description: SLATT_5 Location: 305-821 bp Feature: domain Description: SLATT_5 Location: 305-82 1 bp Feature: gene Location: 828-2198 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1056-1662 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1056-1662 bp Feature: gene Location: 2279-2611 bp Feature: gene Location: 2636-3241 bp Feature: domain Description: Peptidase_S74 Location: 2867-3014 bp Feature: domain Description: Peptidase_S74 Location: 2 867-3014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Peptidase_S74 (pfam13884)