myRT

myRT report for GCA_002463255.1_ASM246325v1

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Seq: NTOE01000032.1 Escherichia coli strain MOD1-EC6213 MOD1-EC6213_32_length_53652_cov_30.9301, whole genome shotgun sequence (53652 bp)
Overview 1 RT 1: 44-7936 bp Neighborhood of RT #1 [44, 7947] RVT-UG8 INT_Rci_Hp1_C INT_P4_C mutS1 Feature: gene Location: 44-247 bp Feature: gene Location: 486-2504 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1056-1506 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 056-1 506 bp Feature: gene Location: 3760-5220 bp Feature: domain Description: INT_Rci_Hp1_C Location: 4135-4342 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 41 35-4342 bp Feature: domain Description: INT_P4_C Location: 4561-5098 bp Feature: domain Description: INT_P4_C Location: 4561 -5098 bp Feature: gene Location: 5365-7947 bp Feature: domain Description: mutS1 Location: 5416-7936 bp Feature: domain Description: mutS1 Location: 541 6-7936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), mutS1 (TIGR01070)

Seq: NTOE01000066.1 Escherichia coli strain MOD1-EC6213 MOD1-EC6213_66_length_10535_cov_79.2644, whole genome shotgun sequence (10535 bp)
Overview 1 RT 1: 3342-6500 bp Neighborhood of RT #1 [3342, 6529] Antirestrict RVT-GII PRK10276 Feature: gene Location: 3342-3767 bp Feature: domain Description: Antirestrict Location: 3474-3765 bp Feature: domain Description: Antirestrict Location: 3474-3765 bp Feature: gene Location: 3815-3970 bp Feature: gene Location: 4204-5691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4609-5299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4609-52 99 bp Feature: gene Location: 5716-6063 bp Feature: gene Location: 6089-6529 bp Feature: domain Description: PRK10276 Location: 6128-6500 bp Feature: domain Description: PRK102 76 Location: 612 8-6500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)