myRT

myRT report for GCA_002464185.1_ASM246418v1

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Seq: NTOI01000126.1 Escherichia coli strain MOD1-EC6208 MOD1-EC6208_126_length_2749_cov_62.3507, whole genome shotgun sequence (2749 bp)
Overview 1 RT 1: 1-2140 bp Neighborhood of RT #1 [1, 2178] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 1-1272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22-754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22-754 bp Feature: domain Description: GIIM Note: maturase Location: 829-1027 bp Feature: domain Description: GIIM Note: maturase Location: 829-1 027 bp Feature: gene Location: 1449-1745 bp Feature: domain Description: PHA02517 Location: 1452-1701 bp Feature: domain Description: PHA0251 7 Location: 1 452-1 701 bp Feature: gene Location: 1774-2178 bp Feature: domain Description: InsE Location: 1804-2140 bp Feature: domain Description: InsE Location: 1 804-21 40 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: NTOI01000012.1 Escherichia coli strain MOD1-EC6208 MOD1-EC6208_12_length_98650_cov_70.5403, whole genome shotgun sequence (98650 bp)
Overview 1 RT 1: 56342-64043 bp Neighborhood of RT #1 [56342, 64180] proA RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 56342-57595 bp Feature: domain Description: proA Location: 56369-57560 bp Feature: domain Description: proA Location: 56369-57560 bp Feature: gene Location: 58149-58619 bp Feature: gene Location: 58966-62175 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 59494-59983 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 59494-59983 bp Feature: domain Description: nitrilase Location: 61489-62086 bp Feature: domain Description: nitrilase Location: 61489-62 086 bp Feature: gene Location: 62470-63273 bp Feature: domain Description: AbiEi_3_N Location: 62503-62764 bp Feature: domain Description: AbiEi_3_N Location: 62 503-62 764 bp Feature: domain Description: AbiEi_3 Location: 62776-63232 bp Feature: domain Description: AbiEi_3 Location: 62 776-632 32 bp Feature: gene Location: 63260-64180 bp Feature: domain Description: AbiEii Location: 63302-64043 bp Feature: domain Description: AbiEii Location: 63302 -64043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: NTOI01000174.1 Escherichia coli strain MOD1-EC6208 MOD1-EC6208_174_length_1329_cov_84.9704, whole genome shotgun sequence (1329 bp)
Overview 1 RT 1: 3-1263 bp Neighborhood of RT #1 [3, 1328] RVT-GII PHA02517 Feature: gene Location: 3-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-3 3 0 bp Feature: gene Location: 921-1328 bp Feature: domain Description: PHA02517 Location: 924-1263 bp Feature: domain Description: PHA02517 Location: 924-1263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)

Seq: NTOI01000061.1 Escherichia coli strain MOD1-EC6208 MOD1-EC6208_61_length_25434_cov_77.9692, whole genome shotgun sequence (25434 bp)
Overview 1 RT 1: 15512-18613 bp Neighborhood of RT #1 [15512, 18621] group_II_RT_mat RVT-GII RVT-GII GIIM YesM Feature: gene Location: 15512-15709 bp Feature: gene Location: 15740-16072 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 15902-16064 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 15902-16064 bp Feature: gene Location: 16069-16260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16072-16129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16072-16129 bp Feature: gene Location: 16288-16809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16294-16576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16294 -16576 bp Feature: domain Description: GIIM Note: maturase Location: 16624-16804 bp Feature: domain Description: GIIM Note: maturase Location: 16624 -16804 bp Feature: gene Location: 17131-17319 bp Feature: gene Location: 17359-18621 bp Feature: domain Description: YesM Location: 17872-18613 bp Feature: domain Description: YesM Location: 17872-18613 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: NTOI01000084.1 Escherichia coli strain MOD1-EC6208 MOD1-EC6208_84_length_11304_cov_37.5958, whole genome shotgun sequence (11304 bp)
Overview 1 RT 1: 10270-11143 bp Neighborhood of RT #1 [10270, 11301] PRK10173 PRK10173 RVT-GII Feature: gene Location: 10270-10719 bp Feature: domain Description: PRK10173 Location: 10273-10711 bp Feature: domain Description: PRK10173 Location: 10273-10711 bp Feature: gene Location: 10703-11014 bp Feature: domain Description: PRK10173 Location: 10706-10925 bp Feature: domain Description: PRK10173 Location: 10706-10925 bp Feature: gene Location: 11053-11301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11071-11143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11071-11143 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII