myRT

myRT report for GCA_002464835.1_ASM246483v1

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Seq: NXNF01000183.1 Escherichia coli strain MOD1-EC1747 MOD1-EC1747_183_length_2584_cov_62.4479, whole genome shotgun sequence (2584 bp)
Overview 1 RT 1: 1-2428 bp Neighborhood of RT #1 [1, 2463] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1-222 bp Feature: gene Location: 334-516 bp Feature: gene Location: 796-2463 bp Feature: RT Description: RVT_N Location: 844-1081 bp Feature: RT Description: RVT_N Location: 844-1 081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1132-1774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 32-1 774 bp Feature: domain Description: GIIM Note: maturase Location: 1825-2059 bp Feature: domain Description: GIIM Note: maturase Location: 1 825-2059 bp Feature: domain Description: HNHc Note: nucleases Location: 2269-2428 bp Feature: domain Description: HNHc Note: nucleases Location: 2269-2428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NXNF01000046.1 Escherichia coli strain MOD1-EC1747 MOD1-EC1747_46_length_37656_cov_32.484, whole genome shotgun sequence (37656 bp)
Overview 1 RT 1: 645-4751 bp Neighborhood of RT #1 [645, 4751] DUF932 RVT-GII Intron_maturas2 HNHc DUF932 Feature: gene Location: 645-1055 bp Feature: gene Location: 1276-1677 bp Feature: domain Description: DUF932 Location: 1387-1669 bp Feature: domain Description: DUF932 Location: 1387-1669 bp Feature: gene Location: 2169-3947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2430-3225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 430-32 2 5 bp Feature: domain Description: Intron_maturas2 Location: 3351-3576 bp Feature: domain Description: Intron_maturas2 Location: 3351-3576 bp Feature: domain Description: HNHc Note: nucleases Location: 3771-3921 bp Feature: domain Description: HNHc Note: nucleases Location: 3771-392 1 bp Feature: gene Location: 4120-4506 bp Feature: domain Description: DUF932 Location: 4126-4471 bp Feature: domain Description: DUF932 Location: 412 6-4471 bp Feature: gene Location: 4506-4751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)