myRT

myRT report for GCA_002464965.1_ASM246496v1

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Seq: NJJB01000010.1 Escherichia coli strain MOD1-EC917 MOD1-EC917_10_length_122866_cov_30.155, whole genome shotgun sequence (122866 bp)
Overview 1 RT 1: 3983-7862 bp Neighborhood of RT #1 [3983, 7867] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 3983-4699 bp Feature: domain Description: rph Location: 3986-4694 bp Feature: domain Description: rph Location: 3986-4694 bp Feature: gene Location: 4750-5406 bp Feature: domain Description: pyrE Location: 4768-5401 bp Feature: domain Description: pyrE Location: 4768-5401 bp Feature: gene Location: 5703-6662 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5838-6387 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5838-6387 bp Feature: gene Location: 6706-7302 bp Feature: domain Description: slmA Location: 6712-7288 bp Feature: domain Description: slmA Location: 671 2-7288 bp Feature: gene Location: 7409-7867 bp Feature: domain Description: dut Location: 7415-7862 bp Feature: domain Description: dut Location: 741 5-7862 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: NJJB01000046.1 Escherichia coli strain MOD1-EC917 MOD1-EC917_46_length_35321_cov_26.5037, whole genome shotgun sequence (35321 bp)
Overview 1 RT 1: 4855-8976 bp Neighborhood of RT #1 [4855, 8976] TIGR02646 COG3950 RVT-Retrons Feature: gene Location: 4855-5505 bp Feature: domain Description: TIGR02646 Location: 4921-5320 bp Feature: domain Description: TIGR02 646 Location: 492 1-532 0 bp Feature: gene Location: 5508-7160 bp Feature: domain Description: COG3950 Location: 5706-7122 bp Feature: domain Description: COG3950 Location: 5706-712 2 bp Feature: gene Location: 7157-8092 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7259-7859 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 72 59-7859 bp Feature: gene Location: 8107-8241 bp Feature: gene Location: 8515-8976 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons