myRT

myRT report for GCA_002465055.1_ASM246505v1

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Seq: NJJM01000038.1 Escherichia coli strain MOD1-EC898 MOD1-EC898_38_length_17281_cov_41.4062, whole genome shotgun sequence (17280 bp)
Overview 1 RT 1: 61-1709 bp Neighborhood of RT #1 [61, 1747] InsE RVT-GII InsE Feature: gene Location: 61-324 bp Feature: domain Description: InsE Location: 88-298 bp Feature: domain Description: InsE Location: 88-298 bp Feature: gene Location: 412-924 bp Feature: gene Location: 953-1270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-1 1 00 bp Feature: gene Location: 1299-1478 bp Feature: gene Location: 1514-1747 bp Feature: domain Description: InsE Location: 1565-1709 bp Feature: domain Description: InsE Location: 1 565-1 709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII

Seq: NJJM01000068.1 Escherichia coli strain MOD1-EC898 MOD1-EC898_68_length_2655_cov_50.4523, whole genome shotgun sequence (2655 bp)
Overview 1 RT 1: 3-2264 bp Neighborhood of RT #1 [3, 2488] Tra5 RVT-GII GIIM Feature: gene Location: 3-356 bp Feature: domain Description: Tra5 Location: 27-309 bp Feature: domain Description: Tra5 Location: 2 7-309 bp Feature: gene Location: 639-845 bp Feature: gene Location: 966-2060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1239-1962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 39-1962 bp Feature: gene Location: 2102-2488 bp Feature: domain Description: GIIM Note: maturase Location: 2111-2264 bp Feature: domain Description: GIIM Note: maturase Location: 2 111-2 2 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388)