myRT

myRT report for GCA_002465305.1_ASM246530v1

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Seq: NJKC01000035.1 Escherichia coli strain MOD1-EC710 MOD1-EC710_35_length_35163_cov_121.132, whole genome shotgun sequence (35163 bp)
Overview 1 RT 1: 173-3508 bp Neighborhood of RT #1 [173, 3693] APH RVT-GII GIIM DUF5440 KfrB Feature: gene Location: 173-946 bp Feature: domain Description: APH Location: 209-944 bp Feature: domain Description: APH Location: 209-944 bp Feature: gene Location: 1063-2388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1324-1939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 324-1 939 bp Feature: domain Description: GIIM Note: maturase Location: 1993-2221 bp Feature: domain Description: GIIM Note: maturase Location: 1 993-2221 bp Feature: gene Location: 2955-3245 bp Feature: domain Description: DUF5440 Location: 2958-3243 bp Feature: domain Description: DUF5440 Location: 2958-3243 bp Feature: gene Location: 3253-3693 bp Feature: domain Description: KfrB Location: 3331-3508 bp Feature: domain Description: KfrB Location: 3331 -3508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT APH (pfam01636), RVT-GII, GIIM (pfam08388), DUF5440 (pfam17509), KfrB (pfam18790)

Seq: NJKC01000004.1 Escherichia coli strain MOD1-EC710 MOD1-EC710_4_length_256859_cov_42.9498, whole genome shotgun sequence (256859 bp)
Overview 1 RT 1: 248279-252499 bp Neighborhood of RT #1 [248279, 252499] RVT-UG7 PRK09692 Feature: gene Location: 248279-248419 bp Feature: gene Location: 248529-249269 bp Feature: gene Location: 249266-250894 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 249674-250103 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2 49674-2 50103 bp Feature: gene Location: 250887-252071 bp Feature: domain Description: PRK09692 Location: 250893-252048 bp Feature: domain Description: PRK09692 Location: 2 50893-2 52 048 bp Feature: gene Location: 252347-252499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional)