myRT

myRT report for GCA_002465465.1_ASM246546v1

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Seq: NJKJ01000025.1 Escherichia coli strain MOD1-EC703 MOD1-EC703_25_length_82494_cov_25.7685, whole genome shotgun sequence (82494 bp)
Overview 1 RT 1: 61685-65035 bp Neighborhood of RT #1 [61685, 65067] PinE RVT-GII GIIM PRK09413 Feature: gene Location: 61685-62332 bp Feature: domain Description: PinE Location: 61778-62327 bp Feature: domain Description: PinE Location: 61 778-62327 bp Feature: gene Location: 62432-62833 bp Feature: gene Location: 63042-64394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63363-63981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63363-63981 bp Feature: domain Description: GIIM Note: maturase Location: 64029-64260 bp Feature: domain Description: GIIM Note: maturase Location: 64029-64260 bp Feature: gene Location: 64465-64815 bp Feature: gene Location: 64870-65067 bp Feature: domain Description: PRK09413 Location: 64873-65035 bp Feature: domain Description: PRK0941 3 Location: 64873-65035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, GIIM (pfam08388), PRK09413 (IS2 repressor TnpA; Reviewed)

Seq: NJKJ01000046.1 Escherichia coli strain MOD1-EC703 MOD1-EC703_46_length_26496_cov_30.8077, whole genome shotgun sequence (26496 bp)
Overview 1 RT 1: 8932-11931 bp Neighborhood of RT #1 [8932, 11931] RVT-GII GIIM RVT-GII Feature: gene Location: 8932-9102 bp Feature: gene Location: 9245-9382 bp Feature: gene Location: 9452-9973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9458-9740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9458-9740 bp Feature: domain Description: GIIM Note: maturase Location: 9788-9968 bp Feature: domain Description: GIIM Note: maturase Location: 9788-9968 bp Feature: gene Location: 10001-10540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10331-10409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10331-10409 bp Feature: gene Location: 10571-10768 bp Feature: gene Location: 11026-11931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NJKJ01000085.1 Escherichia coli strain MOD1-EC703 MOD1-EC703_85_length_2309_cov_35.3871, whole genome shotgun sequence (2309 bp)
Overview 1 RT 1: 197-2173 bp Neighborhood of RT #1 [197, 2173] RVT-GII GIIM Feature: gene Location: 197-346 bp Feature: gene Location: 419-1669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 623-1280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 623 -1280 bp Feature: domain Description: GIIM Note: maturase Location: 1361-1583 bp Feature: domain Description: GIIM Note: maturase Location: 13 61-1583 bp Feature: gene Location: 1693-1980 bp Feature: gene Location: 2033-2173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NJKJ01000088.1 Escherichia coli strain MOD1-EC703 MOD1-EC703_88_length_1828_cov_78.3044, whole genome shotgun sequence (1828 bp)
Overview 1 RT 1: 96-1374 bp Neighborhood of RT #1 [96, 1619] RVT-GII GIIM Feature: gene Location: 96-1619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369-1101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369-1101 bp Feature: domain Description: GIIM Note: maturase Location: 1176-1374 bp Feature: domain Description: GIIM Note: maturase Location: 1176-1374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)