myRT

myRT report for GCA_002465485.1_ASM246548v1

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Seq: NJKL01000058.1 Escherichia coli strain MOD1-EC700 MOD1-EC700_58_length_22169_cov_41.2304, whole genome shotgun sequence (22169 bp)
Overview 1 RT 1: 3608-7949 bp Neighborhood of RT #1 [3608, 7960] InsE PHA02517 RVT-GII GIIM PHA02517 TetR_N TetR_C_28 Feature: gene Location: 3608-3934 bp Feature: domain Description: InsE Location: 3611-3932 bp Feature: domain Description: InsE Location: 361 1 -3932 bp Feature: gene Location: 3934-4413 bp Feature: domain Description: PHA02517 Location: 3994-4348 bp Feature: domain Description: PHA0251 7 Location: 3994-4348 bp Feature: gene Location: 5005-6528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5278-6010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5278-601 0 bp Feature: domain Description: GIIM Note: maturase Location: 6085-6283 bp Feature: domain Description: GIIM Note: maturase Location: 6085-6283 bp Feature: gene Location: 6705-7091 bp Feature: domain Description: PHA02517 Location: 6708-7089 bp Feature: domain Description: PHA0251 7 Location: 6708-7089 bp Feature: gene Location: 7382-7960 bp Feature: domain Description: TetR_N Location: 7451-7586 bp Feature: domain Description: TetR_N Location: 7451 -7586 bp Feature: domain Description: TetR_C_28 Location: 7661-7949 bp Feature: domain Description: TetR_C_28 Location: 7661 -7949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), TetR_N (pfam00440), TetR_C_28 (pfam17937)

Seq: NJKL01000008.1 Escherichia coli strain MOD1-EC700 MOD1-EC700_8_length_119721_cov_28.8045, whole genome shotgun sequence (119721 bp)
Overview 1 RT 1: 114595-118477 bp Neighborhood of RT #1 [114595, 118482] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 114595-115053 bp Feature: domain Description: dut Location: 114601-115048 bp Feature: domain Description: dut Location: 114601-115048 bp Feature: gene Location: 115160-115756 bp Feature: domain Description: slmA Location: 115166-115742 bp Feature: domain Description: slmA Location: 115166-115742 bp Feature: gene Location: 115802-116761 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 115937-116486 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 115937-116486 bp Feature: gene Location: 117059-117715 bp Feature: domain Description: pyrE Location: 117077-117710 bp Feature: domain Description: pyrE Location: 117077-117710 bp Feature: gene Location: 117766-118482 bp Feature: domain Description: rph Location: 117769-118477 bp Feature: domain Description: rph Location: 117769-118477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)