myRT

myRT report for GCA_002465505.1_ASM246550v1

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Seq: NJKM01000037.1 Escherichia coli strain MOD1-EC699 MOD1-EC699_37_length_17515_cov_49.2158, whole genome shotgun sequence (17515 bp)
Overview 1 RT 1: 13003-17447 bp Neighborhood of RT #1 [13003, 17512] AAA_15 TOPRIM_OLD PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 13003-14451 bp Feature: domain Description: AAA_15 Location: 13588-13723 bp Feature: domain Description: AAA_1 5 Location: 1 3588-1 3723 bp Feature: domain Description: TOPRIM_OLD Location: 13888-14140 bp Feature: domain Description: TOPRIM_OLD Location: 1 3888-1 41 40 bp Feature: gene Location: 14622-15068 bp Feature: domain Description: PHA02517 Location: 14625-15066 bp Feature: domain Description: PHA0251 7 Location: 1 4625-1 5066 bp Feature: gene Location: 15185-16708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15458-16190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5458-1 61 90 bp Feature: domain Description: GIIM Note: maturase Location: 16265-16463 bp Feature: domain Description: GIIM Note: maturase Location: 1 6265-1 6463 bp Feature: gene Location: 16662-17087 bp Feature: gene Location: 17300-17512 bp Feature: domain Description: PHA02517 Location: 17303-17447 bp Feature: domain Description: PHA0251 7 Location: 1 7303-1 7447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), TOPRIM_OLD (cd01026), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)