myRT

myRT report for GCA_002465555.1_ASM246555v1

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Seq: NJJD01000039.1 Escherichia coli strain MOD1-EC914 MOD1-EC914_39_length_28678_cov_23.9748, whole genome shotgun sequence (28678 bp)
Overview 1 RT 1: 810-5206 bp Neighborhood of RT #1 [810, 5206] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C Feature: gene Location: 810-1157 bp Feature: domain Description: TnpB_IS66 Location: 837-1128 bp Feature: domain Description: TnpB_IS66 Location: 837-1 1 28 bp Feature: gene Location: 1177-2616 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1315-1540 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 31 5-1 540 bp Feature: domain Description: zf-IS66 Location: 1564-1693 bp Feature: domain Description: zf-IS66 Location: 1 564-1 693 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1738-2575 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 738-2575 bp Feature: gene Location: 3078-4310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3279-3933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3279-3933 bp Feature: domain Description: GIIM Note: maturase Location: 4011-4233 bp Feature: domain Description: GIIM Note: maturase Location: 401 1 -4233 bp Feature: gene Location: 4426-4572 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4438-4549 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4438-4549 bp Feature: gene Location: 4640-5206 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717)

Seq: NJJD01000069.1 Escherichia coli strain MOD1-EC914 MOD1-EC914_69_length_3156_cov_33.7463, whole genome shotgun sequence (3156 bp)
Overview 1 RT 1: 217-2193 bp Neighborhood of RT #1 [217, 2193] RVT-GII GIIM Feature: gene Location: 217-366 bp Feature: gene Location: 439-1689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 643-1300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 643-1300 bp Feature: domain Description: GIIM Note: maturase Location: 1381-1603 bp Feature: domain Description: GIIM Note: maturase Location: 1381-1603 bp Feature: gene Location: 1677-2000 bp Feature: gene Location: 2053-2193 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)