myRT

myRT report for GCA_002465635.1_ASM246563v1

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Seq: NJJL01000038.1 Escherichia coli strain MOD1-EC900 MOD1-EC900_38_length_38352_cov_28.3985, whole genome shotgun sequence (38352 bp)
Overview 1 RT 1: 993-6007 bp Neighborhood of RT #1 [993, 6012] RVT-Retrons Q P Feature: gene Location: 993-1148 bp Feature: gene Location: 1406-2254 bp Feature: gene Location: 2256-3185 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2355-2940 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2355-2940 bp Feature: gene Location: 3221-4246 bp Feature: domain Description: Q Location: 3224-4238 bp Feature: domain Description: Q Location: 3224-4238 bp Feature: gene Location: 4246-6012 bp Feature: domain Description: P Location: 4273-6007 bp Feature: domain Description: P Location: 4273-6007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Q (PHA02536), P (PHA02535)

Seq: NJJL01000063.1 Escherichia coli strain MOD1-EC900 MOD1-EC900_63_length_5664_cov_34.5924, whole genome shotgun sequence (5664 bp)
Overview 1 RT 1: 90-2171 bp Neighborhood of RT #1 [90, 2171] RVT-GII GIIM T3SS_NleG Feature: gene Location: 90-578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96-234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96-2 34 bp Feature: domain Description: GIIM Note: maturase Location: 318-537 bp Feature: domain Description: GIIM Note: maturase Location: 318-537 bp Feature: gene Location: 958-1578 bp Feature: domain Description: T3SS_NleG Location: 1276-1573 bp Feature: domain Description: T3SS_NleG Location: 12 76-1573 bp Feature: gene Location: 1986-2171 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), T3SS_NleG (pfam06416)