myRT

myRT report for GCA_002466305.1_ASM246630v1

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Seq: NJMC01000013.1 Escherichia coli strain MOD1-EC322 MOD1-EC322_13_length_103987_cov_58.4829, whole genome shotgun sequence (103987 bp)
Overview 1 RT 1: 24352-29496 bp Neighborhood of RT #1 [24352, 29519] AAA_23 Smc RVT-Retrons HipA_Ec_like Feature: gene Location: 24352-26178 bp Feature: domain Description: AAA_23 Location: 24406-25141 bp Feature: domain Description: AAA_23 Location: 24406-251 41 bp Feature: domain Description: Smc Location: 25387-25678 bp Feature: domain Description: Smc Location: 25387-25678 bp Feature: gene Location: 26346-26807 bp Feature: gene Location: 27175-27576 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27277-27520 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27277-27520 bp Feature: gene Location: 27700-28107 bp Feature: gene Location: 28197-29519 bp Feature: domain Description: HipA_Ec_like Location: 28260-29496 bp Feature: domain Description: HipA_Ec_like Location: 28260-29496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), Smc (COG1196), RVT-Retrons, HipA_Ec_like (cd17808)

Seq: NJMC01000007.1 Escherichia coli strain MOD1-EC322 MOD1-EC322_7_length_167837_cov_63.5336, whole genome shotgun sequence (167837 bp)
Overview 1 RT 1: 49574-53453 bp Neighborhood of RT #1 [49574, 53458] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 49574-50290 bp Feature: domain Description: rph Location: 49577-50285 bp Feature: domain Description: rph Location: 49577-502 85 bp Feature: gene Location: 50341-50997 bp Feature: domain Description: pyrE Location: 50359-50992 bp Feature: domain Description: pyrE Location: 50359-50992 bp Feature: gene Location: 51294-52253 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51429-51978 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5142 9-51978 bp Feature: gene Location: 52297-52893 bp Feature: domain Description: slmA Location: 52303-52879 bp Feature: domain Description: slmA Location: 52 303-52 879 bp Feature: gene Location: 53000-53458 bp Feature: domain Description: dut Location: 53006-53453 bp Feature: domain Description: dut Location: 53006-53453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)