myRT

myRT report for GCA_002466345.1_ASM246634v1

Download annotations/find similar RTs

Seq: NJMD01000074.1 Escherichia coli strain MOD1-EC321 MOD1-EC321_74_length_14164_cov_51.8727, whole genome shotgun sequence (14164 bp)
Overview 1 RT 1: 7191-11311 bp Neighborhood of RT #1 [7191, 11311] TIGR02646 COG3950 RVT-Retrons Feature: gene Location: 7191-7841 bp Feature: domain Description: TIGR02646 Location: 7257-7656 bp Feature: domain Description: TIGR02646 Location: 7257-7656 bp Feature: gene Location: 7844-9496 bp Feature: domain Description: COG3950 Location: 8042-9458 bp Feature: domain Description: COG3950 Location: 8042-9458 bp Feature: gene Location: 9493-10428 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9595-10195 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9595-1 01 95 bp Feature: gene Location: 10443-10577 bp Feature: gene Location: 10862-11311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons

Seq: NJMD01000007.1 Escherichia coli strain MOD1-EC321 MOD1-EC321_7_length_137900_cov_61.9371, whole genome shotgun sequence (137900 bp)
Overview 1 RT 1: 19640-23519 bp Neighborhood of RT #1 [19640, 23524] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 19640-20356 bp Feature: domain Description: rph Location: 19643-20351 bp Feature: domain Description: rph Location: 19643-2 0351 bp Feature: gene Location: 20407-21063 bp Feature: domain Description: pyrE Location: 20425-21058 bp Feature: domain Description: pyrE Location: 2 042 5-2 1058 bp Feature: gene Location: 21360-22319 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21495-22044 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 1495-2 2 044 bp Feature: gene Location: 22363-22959 bp Feature: domain Description: slmA Location: 22369-22945 bp Feature: domain Description: slmA Location: 2 2 369-2 2 945 bp Feature: gene Location: 23066-23524 bp Feature: domain Description: dut Location: 23072-23519 bp Feature: domain Description: dut Location: 2 3072 -2 3519 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)