myRT

myRT report for GCA_002466775.1_ASM246677v1

Download annotations/find similar RTs

Seq: NJKN01000016.1 Escherichia coli strain MOD1-EC698 MOD1-EC698_16_length_110831_cov_45.9904, whole genome shotgun sequence (110831 bp)
Overview 1 RT 1: 49289-53171 bp Neighborhood of RT #1 [49289, 53176] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 49289-49747 bp Feature: domain Description: dut Location: 49295-49742 bp Feature: domain Description: dut Location: 49295-49742 bp Feature: gene Location: 49854-50450 bp Feature: domain Description: slmA Location: 49860-50436 bp Feature: domain Description: slmA Location: 49860-50436 bp Feature: gene Location: 50496-51455 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50631-51180 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50631 -51 1 80 bp Feature: gene Location: 51753-52409 bp Feature: domain Description: pyrE Location: 51771-52404 bp Feature: domain Description: pyrE Location: 51 771 -52404 bp Feature: gene Location: 52460-53176 bp Feature: domain Description: rph Location: 52463-53171 bp Feature: domain Description: rph Location: 52463-531 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: NJKN01000004.1 Escherichia coli strain MOD1-EC698 MOD1-EC698_4_length_211624_cov_41.8894, whole genome shotgun sequence (211624 bp)
Overview 1 RT 1: 28791-32502 bp Neighborhood of RT #1 [28791, 32765] Resolvase RVT-Retrons HTH_XRE Feature: gene Location: 28791-29456 bp Feature: domain Description: Resolvase Location: 28812-29229 bp Feature: domain Description: Resolvase Location: 2 8812 -2 92 2 9 bp Feature: gene Location: 29505-29687 bp Feature: gene Location: 29724-31430 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29874-30471 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 9874-30471 bp Feature: gene Location: 31567-32064 bp Feature: gene Location: 32304-32765 bp Feature: domain Description: HTH_XRE Location: 32334-32502 bp Feature: domain Description: HTH_XRE Location: 32 334-32 502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), RVT-Retrons, HTH_XRE (smart00530)