myRT

myRT report for GCA_002466825.1_ASM246682v1

Download annotations/find similar RTs

Seq: NJKS01000124.1 Escherichia coli strain MOD1-EC693 MOD1-EC693_124_length_2272_cov_556.051, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 73-1 371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NJKS01000007.1 Escherichia coli strain MOD1-EC693 MOD1-EC693_7_length_147601_cov_34.1992, whole genome shotgun sequence (147600 bp)
Overview 1 RT 1: 30683-34565 bp Neighborhood of RT #1 [30683, 34570] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 30683-31399 bp Feature: domain Description: rph Location: 30686-31394 bp Feature: domain Description: rph Location: 30686-31394 bp Feature: gene Location: 31450-32106 bp Feature: domain Description: pyrE Location: 31468-32101 bp Feature: domain Description: pyrE Location: 31468-32 101 bp Feature: gene Location: 32404-33363 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32539-33088 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32 539-33088 bp Feature: gene Location: 33409-34005 bp Feature: domain Description: slmA Location: 33415-33991 bp Feature: domain Description: slmA Location: 33415-33991 bp Feature: gene Location: 34112-34570 bp Feature: domain Description: dut Location: 34118-34565 bp Feature: domain Description: dut Location: 34118-34565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)