myRT

myRT report for GCA_002467485.1_ASM246748v1

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Seq: NMLK01000005.1 Escherichia coli strain MOD1-EC6717 MOD1-EC6717_5_length_233531_cov_56.204, whole genome shotgun sequence (233408 bp)
Overview 1 RT 1: 6268-9028 bp Neighborhood of RT #1 [6268, 9033] RVT-UG17 SLATT_5 PRK10597 Feature: gene Location: 6268-6405 bp Feature: gene Location: 6421-6555 bp Feature: gene Location: 6663-8033 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6891-7497 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 6891 -7497 bp Feature: gene Location: 8011-8562 bp Feature: domain Description: SLATT_5 Location: 8017-8533 bp Feature: domain Description: SLATT_5 Location: 801 7-8533 bp Feature: gene Location: 8785-9033 bp Feature: domain Description: PRK10597 Location: 8788-9028 bp Feature: domain Description: PRK1 0597 Location: 8788-9028 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: NMLK01000009.1 Escherichia coli strain MOD1-EC6717 MOD1-EC6717_9_length_188675_cov_58.5948, whole genome shotgun sequence (188675 bp)
Overview 1 RT 1: 130973-134855 bp Neighborhood of RT #1 [130973, 134860] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 130973-131689 bp Feature: domain Description: rph Location: 130976-131684 bp Feature: domain Description: rph Location: 130976-131684 bp Feature: gene Location: 131740-132396 bp Feature: domain Description: pyrE Location: 131758-132391 bp Feature: domain Description: pyrE Location: 131758-132 391 bp Feature: gene Location: 132694-133653 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132829-133378 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132 82 9-133378 bp Feature: gene Location: 133699-134295 bp Feature: domain Description: slmA Location: 133705-134281 bp Feature: domain Description: slmA Location: 133705-1342 81 bp Feature: gene Location: 134402-134860 bp Feature: domain Description: dut Location: 134408-134855 bp Feature: domain Description: dut Location: 134408-134855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)