myRT

myRT report for GCA_002467705.1_ASM246770v1

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Seq: NMOA01000043.1 Escherichia coli strain MOD1-EC6585 MOD1-EC6585_43_length_30604_cov_29.0177, whole genome shotgun sequence (30604 bp)
Overview 1 RT 1: 25462-30603 bp Neighborhood of RT #1 [25462, 30603] proA PRK09692 RVT-UG7 Feature: gene Location: 25462-26715 bp Feature: domain Description: proA Location: 25489-26680 bp Feature: domain Description: proA Location: 25489-26680 bp Feature: gene Location: 27070-28254 bp Feature: domain Description: PRK09692 Location: 27076-28231 bp Feature: domain Description: PRK09692 Location: 27076-28231 bp Feature: gene Location: 28247-29875 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 28655-29084 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 28655-29084 bp Feature: gene Location: 29872-30603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), PRK09692 (Integrase; provisional), RVT-UG7

Seq: NMOA01000044.1 Escherichia coli strain MOD1-EC6585 MOD1-EC6585_44_length_29930_cov_34.3315, whole genome shotgun sequence (29930 bp)
Overview 1 RT 1: 2-3795 bp Neighborhood of RT #1 [2, 3824] RVT-UG3 COG4688 COG4688 Feature: gene Location: 2-1327 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 458-935 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 458-935 bp Feature: gene Location: 1379-1798 bp Feature: gene Location: 1791-3824 bp Feature: domain Description: COG4688 Location: 1794-2700 bp Feature: domain Description: COG4688 Location: 1794-2 700 bp Feature: domain Description: COG4688 Location: 3069-3795 bp Feature: domain Description: COG4688 Location: 3069-3795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3, COG4688 (Uncharacterized protein )

Seq: NMOA01000005.1 Escherichia coli strain MOD1-EC6585 MOD1-EC6585_5_length_220941_cov_39.7337, whole genome shotgun sequence (220941 bp)
Overview 1 RT 1: 210864-216654 bp Neighborhood of RT #1 [210864, 216662] DEDD_Tnp_IS110 Transposase_20 PHA02517 RVT-GII GIIM PHA02517 deoxyribose_mutarotase Feature: gene Location: 210864-212222 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 210927-211359 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 210927-2113 59 bp Feature: domain Description: Transposase_20 Location: 211755-212004 bp Feature: domain Description: Transposase_20 Location: 211755-212004 bp Feature: gene Location: 212101-212739 bp Feature: domain Description: PHA02517 Location: 212338-212674 bp Feature: domain Description: PHA02517 Location: 2123 3 8-212674 bp Feature: gene Location: 213331-214854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 213604-214336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 213 604-2143 3 6 bp Feature: domain Description: GIIM Note: maturase Location: 214411-214609 bp Feature: domain Description: GIIM Note: maturase Location: 214411-214609 bp Feature: gene Location: 215019-215423 bp Feature: domain Description: PHA02517 Location: 215022-215412 bp Feature: domain Description: PHA02517 Location: 215022-215412 bp Feature: gene Location: 215649-216662 bp Feature: domain Description: deoxyribose_mutarotase Location: 215790-216654 bp Feature: domain Description: deoxyribose_mutarotase Location: 215790-216654 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), deoxyribose_mutarotase (cd09269)