myRT

myRT report for GCA_002467845.1_ASM246784v1

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Seq: NMNB01000031.1 Escherichia coli strain MOD1-EC7009 MOD1-EC7009_31_length_35501_cov_33.4093, whole genome shotgun sequence (35501 bp)
Overview 1 RT 1: 16277-20381 bp Neighborhood of RT #1 [16277, 20395] InsG Transposase_20 RVT-GII GIIM rve_2 Feature: gene Location: 16277-16429 bp Feature: gene Location: 16456-17847 bp Feature: domain Description: InsG Location: 16459-17380 bp Feature: domain Description: InsG Location: 1 6459-1 7380 bp Feature: domain Description: Transposase_20 Location: 17503-17749 bp Feature: domain Description: Transposase_20 Location: 1 7503-1 7749 bp Feature: gene Location: 18234-19622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18564-19182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8564-1 91 82 bp Feature: domain Description: GIIM Note: maturase Location: 19230-19461 bp Feature: domain Description: GIIM Note: maturase Location: 1 9230-1 9461 bp Feature: gene Location: 19850-20167 bp Feature: gene Location: 20243-20395 bp Feature: domain Description: rve_2 Location: 20273-20381 bp Feature: domain Description: rve_2 Location: 20273-20381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsG (COG3385), Transposase_20 (pfam02371), RVT-GII, GIIM (pfam08388), rve_2 (pfam13333)

Seq: NMNB01000053.1 Escherichia coli strain MOD1-EC7009 MOD1-EC7009_53_length_11000_cov_47.6688, whole genome shotgun sequence (11000 bp)
Overview 1 RT 1: 3510-10997 bp Neighborhood of RT #1 [3510, 10997] RVT-GII DDE_Tnp_IS66 HTH_23 InsE RVT-GII RVT-GII Feature: gene Location: 3510-3785 bp Feature: gene Location: 3981-4142 bp Feature: gene Location: 4224-4934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4425-4926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442 5-492 6 bp Feature: gene Location: 4929-5348 bp Feature: gene Location: 5386-5775 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5491-5734 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5491-5734 bp Feature: gene Location: 7194-7844 bp Feature: domain Description: HTH_23 Location: 7245-7344 bp Feature: domain Description: HTH_2 3 Location: 72 45-7344 bp Feature: domain Description: InsE Location: 7470-7821 bp Feature: domain Description: InsE Location: 7470-782 1 bp Feature: gene Location: 8216-8419 bp Feature: gene Location: 8826-9200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8832-9003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8832 -9003 bp Feature: gene Location: 9216-10028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9489-9945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9489-9945 bp Feature: gene Location: 10149-10352 bp Feature: gene Location: 10539-10997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_IS66 (pfam03050), HTH_23 (pfam13384), InsE (COG2963)