myRT

myRT report for GCA_002468255.1_ASM246825v1

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Seq: NMKH01000060.1 Escherichia coli strain MOD1-EC6901 MOD1-EC6901_60_length_16600_cov_39.3786, whole genome shotgun sequence (16600 bp)
Overview 1 RT 1: 8914-12803 bp Neighborhood of RT #1 [8914, 12808] RVT-GII RVT-GII GIIM LacI PBP1_GntR Feature: gene Location: 8914-9267 bp Feature: gene Location: 9626-9823 bp Feature: gene Location: 9992-10426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10184-10400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 84-1 0400 bp Feature: gene Location: 10399-11250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10402-10810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0402-1 081 0 bp Feature: domain Description: GIIM Note: maturase Location: 10858-11080 bp Feature: domain Description: GIIM Note: maturase Location: 1 0858-1 1 080 bp Feature: gene Location: 11428-11646 bp Feature: gene Location: 11777-12808 bp Feature: domain Description: LacI Location: 11819-11954 bp Feature: domain Description: LacI Location: 1 1 81 9-1 1 954 bp Feature: domain Description: PBP1_GntR Location: 11993-12803 bp Feature: domain Description: PBP1 _GntR Location: 1 1 993-1 2803 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), LacI (pfam00356), PBP1_GntR (cd01575)

Seq: NMKH01000086.1 Escherichia coli strain MOD1-EC6901 MOD1-EC6901_86_length_6009_cov_38.049, whole genome shotgun sequence (6009 bp)
Overview 1 RT 1: 3-6008 bp Neighborhood of RT #1 [3, 6007] RhsA RVT-GII group_II_RT_mat YhhI YhhI YhhI Feature: gene Location: 3-2507 bp Feature: domain Description: RhsA Location: 6-2073 bp Feature: domain Description: RhsA Location: 6-2 073 bp Feature: gene Location: 2872-3099 bp Feature: gene Location: 3350-4429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3821-4412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382 1-4412 bp Feature: gene Location: 4451-4702 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4457-4685 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4457-4685 bp Feature: gene Location: 5066-6007 bp Feature: domain Description: YhhI Location: 5072-5417 bp Feature: domain Description: YhhI Location: 5072 -5417 bp Feature: domain Description: YhhI Location: 5474-5828 bp Feature: domain Description: YhhI Location: 5474-582 8 bp Feature: domain Description: YhhI Location: 5879-6008 bp Feature: domain Description: YhhI Location: 5879-6008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RhsA (COG3209), RVT-GII, group_II_RT_mat (TIGR04416), YhhI (COG5433)