myRT

myRT report for GCA_002468575.1_ASM246857v1

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Seq: NMLE01000069.1 Escherichia coli strain MOD1-EC6730 MOD1-EC6730_69_length_17557_cov_35.1012, whole genome shotgun sequence (17557 bp)
Overview 1 RT 1: 13587-17554 bp Neighborhood of RT #1 [13587, 17556] DUF905 DUF932 RVT-GII Intron_maturas2 HNHc DUF932 Antirestrict Feature: gene Location: 13587-13820 bp Feature: domain Description: DUF905 Location: 13611-13809 bp Feature: domain Description: DUF905 Location: 1 361 1 -1 3809 bp Feature: gene Location: 13920-14318 bp Feature: domain Description: DUF932 Location: 14028-14310 bp Feature: domain Description: DUF932 Location: 1 4028-1 431 0 bp Feature: gene Location: 14810-16588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15071-15866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5071 -1 5866 bp Feature: domain Description: Intron_maturas2 Location: 15992-16217 bp Feature: domain Description: Intron_maturas2 Location: 1 5992-1 621 7 bp Feature: domain Description: HNHc Note: nucleases Location: 16412-16562 bp Feature: domain Description: HNHc Note: nucleases Location: 1 641 2-1 6562 bp Feature: gene Location: 16740-17147 bp Feature: domain Description: DUF932 Location: 16746-17112 bp Feature: domain Description: DUF932 Location: 1 6746-1 71 1 2 bp Feature: gene Location: 17239-17556 bp Feature: domain Description: Antirestrict Location: 17437-17554 bp Feature: domain Description: Antirestrict Location: 1 7437-1 7554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Antirestrict (pfam03230)

Seq: NMLE01000096.1 Escherichia coli strain MOD1-EC6730 MOD1-EC6730_96_length_7289_cov_21.5085, whole genome shotgun sequence (7289 bp)
Overview 1 RT 1: 1-2690 bp Neighborhood of RT #1 [1, 2690] InsE RVT-GII GIIM Feature: gene Location: 1-168 bp Feature: domain Description: InsE Location: 4-166 bp Feature: domain Description: InsE Location: 4-166 bp Feature: gene Location: 609-1955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 897-1515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 897-1515 bp Feature: domain Description: GIIM Note: maturase Location: 1563-1794 bp Feature: domain Description: GIIM Note: maturase Location: 1563-1794 bp Feature: gene Location: 1986-2183 bp Feature: gene Location: 2547-2690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388)