myRT

myRT report for GCA_002468655.1_ASM246865v1

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Seq: NMLJ01000015.1 Escherichia coli strain MOD1-EC6718 MOD1-EC6718_15_length_117496_cov_40.5372, whole genome shotgun sequence (117496 bp)
Overview 1 RT 1: 12669-16551 bp Neighborhood of RT #1 [12669, 16556] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 12669-13127 bp Feature: domain Description: dut Location: 12675-13122 bp Feature: domain Description: dut Location: 1 2675-1 31 22 bp Feature: gene Location: 13234-13830 bp Feature: domain Description: slmA Location: 13240-13816 bp Feature: domain Description: slmA Location: 1 3240-1 381 6 bp Feature: gene Location: 13876-14835 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14011-14560 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 401 1 -1 4560 bp Feature: gene Location: 15133-15789 bp Feature: domain Description: pyrE Location: 15151-15784 bp Feature: domain Description: pyrE Location: 1 51 51 -1 5784 bp Feature: gene Location: 15840-16556 bp Feature: domain Description: rph Location: 15843-16551 bp Feature: domain Description: rph Location: 1 5843-1 6551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: NMLJ01000052.1 Escherichia coli strain MOD1-EC6718 MOD1-EC6718_52_length_14120_cov_35.0092, whole genome shotgun sequence (14120 bp)
Overview 1 RT 1: 8599-13891 bp Neighborhood of RT #1 [8599, 14118] SLATT_5 RVT-UG17 phage_tail_N Peptidase_S74 Feature: gene Location: 8599-8739 bp Feature: gene Location: 8752-9303 bp Feature: domain Description: SLATT_5 Location: 8758-9274 bp Feature: domain Description: SLATT_5 Location: 8758-92 74 bp Feature: gene Location: 9281-10651 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 9509-10115 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 9509-10115 bp Feature: gene Location: 10732-11064 bp Feature: gene Location: 11089-14118 bp Feature: domain Description: phage_tail_N Location: 11095-11302 bp Feature: domain Description: phage_tail_N Location: 11095-11302 bp Feature: domain Description: Peptidase_S74 Location: 13744-13891 bp Feature: domain Description: Peptidase_S74 Location: 13744-13891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, phage_tail_N (pfam08400), Peptidase_S74 (pfam13884)