myRT

myRT report for GCA_002468745.1_ASM246874v1

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Seq: NMLQ01000183.1 Escherichia coli strain MOD1-EC6612 MOD1-EC6612_183_length_2306_cov_354.8, whole genome shotgun sequence (2306 bp)
Overview 1 RT 1: 16-1959 bp Neighborhood of RT #1 [16, 2204] RVT-GII GIIM Feature: gene Location: 16-387 bp Feature: gene Location: 681-2204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954-1686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954-1 686 bp Feature: domain Description: GIIM Note: maturase Location: 1761-1959 bp Feature: domain Description: GIIM Note: maturase Location: 1 761 -1 959 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NMLQ01000036.1 Escherichia coli strain MOD1-EC6612 MOD1-EC6612_36_length_30639_cov_103.6, whole genome shotgun sequence (30639 bp)
Overview 1 RT 1: 18517-22800 bp Neighborhood of RT #1 [18517, 22808] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 18517-19422 bp Feature: gene Location: 19560-19751 bp Feature: gene Location: 19908-20447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20238-20316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 02 38-2 0316 bp Feature: gene Location: 20475-20996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20481-20763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0481-2 0763 bp Feature: domain Description: GIIM Note: maturase Location: 20811-20991 bp Feature: domain Description: GIIM Note: maturase Location: 2 0811-2 0991 bp Feature: gene Location: 21318-21506 bp Feature: gene Location: 21546-22808 bp Feature: domain Description: YesM Location: 22059-22800 bp Feature: domain Description: YesM Location: 2 2 059-2 2 800 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: NMLQ01000040.1 Escherichia coli strain MOD1-EC6612 MOD1-EC6612_40_length_198657_cov_93.8, whole genome shotgun sequence (198657 bp)
Overview 1 RT 1: 128183-134214 bp Neighborhood of RT #1 [128183, 134214] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 128183-129103 bp Feature: domain Description: AbiEii Location: 128225-128966 bp Feature: domain Description: AbiEii Location: 128225-128966 bp Feature: gene Location: 129090-129893 bp Feature: domain Description: AbiEi_3_N Location: 129123-129384 bp Feature: domain Description: AbiEi_3 _N Location: 129123 -1293 84 bp Feature: domain Description: AbiEi_3 Location: 129396-129852 bp Feature: domain Description: AbiEi_3 Location: 1293 96-129852 bp Feature: gene Location: 130188-133397 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 130716-131205 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 13 0716-13 1205 bp Feature: domain Description: nitrilase Location: 132711-133308 bp Feature: domain Description: nitrilase Location: 13 2711-13 3 3 08 bp Feature: gene Location: 133558-133698 bp Feature: domain Description: Phage_ASH Location: 133585-133678 bp Feature: domain Description: Phage_ASH Location: 13 3 585-13 3 678 bp Feature: gene Location: 133744-134214 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)