myRT

myRT report for GCA_002468825.1_ASM246882v1

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Seq: NMLX01000102.1 Escherichia coli strain MOD1-EC6599 MOD1-EC6599_102_length_8923_cov_62.1098, whole genome shotgun sequence (8923 bp)
Overview 1 RT 1: 5243-8655 bp Neighborhood of RT #1 [5243, 8663] InsE PHA02517 RVT-GII GIIM Tra5 Feature: gene Location: 5243-5542 bp Feature: domain Description: InsE Location: 5273-5537 bp Feature: domain Description: InsE Location: 5273-5537 bp Feature: gene Location: 5539-6006 bp Feature: domain Description: PHA02517 Location: 5605-5944 bp Feature: domain Description: PHA0251 7 Location: 5605-5944 bp Feature: gene Location: 6598-7839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6871-7603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6871 -7603 bp Feature: domain Description: GIIM Note: maturase Location: 7678-7834 bp Feature: domain Description: GIIM Note: maturase Location: 7678-7834 bp Feature: gene Location: 7891-8121 bp Feature: gene Location: 8232-8663 bp Feature: domain Description: Tra5 Location: 8238-8655 bp Feature: domain Description: Tra5 Location: 8238-8655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)

Seq: NMLX01000068.1 Escherichia coli strain MOD1-EC6599 MOD1-EC6599_68_length_22693_cov_52.685, whole genome shotgun sequence (22693 bp)
Overview 1 RT 1: 2-3256 bp Neighborhood of RT #1 [2, 3256] PRK09413 Inovirus_Gp2 RVT-GII Feature: gene Location: 2-145 bp Feature: domain Description: PRK09413 Location: 5-146 bp Feature: domain Description: PRK09413 Location: 5-146 bp Feature: gene Location: 702-1265 bp Feature: domain Description: Inovirus_Gp2 Location: 759-1200 bp Feature: domain Description: Inovirus_Gp2 Location: 759-12 00 bp Feature: gene Location: 1591-2754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1705-2392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1705-2 392 bp Feature: gene Location: 2741-3049 bp Feature: gene Location: 3083-3256 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK09413 (IS2 repressor TnpA; Reviewed), Inovirus_Gp2 (pfam11726)