myRT

myRT report for GCA_002469045.1_ASM246904v1

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Seq: NMMM01000059.1 Escherichia coli strain MOD1-EC6580 MOD1-EC6580_59_length_21080_cov_45.9383, whole genome shotgun sequence (21080 bp)
Overview 1 RT 1: 12863-15778 bp Neighborhood of RT #1 [12863, 15843] RVT-GII GIIM PHA02517 Feature: gene Location: 12863-13006 bp Feature: gene Location: 13031-13216 bp Feature: gene Location: 13303-14826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13576-14308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3576-1 4308 bp Feature: domain Description: GIIM Note: maturase Location: 14383-14581 bp Feature: domain Description: GIIM Note: maturase Location: 1 4383-1 4581 bp Feature: gene Location: 14780-15205 bp Feature: gene Location: 15418-15843 bp Feature: domain Description: PHA02517 Location: 15442-15778 bp Feature: domain Description: PHA0251 7 Location: 1 5442-1 5778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: NMMM01000064.1 Escherichia coli strain MOD1-EC6580 MOD1-EC6580_64_length_18277_cov_41.3016, whole genome shotgun sequence (18277 bp)
Overview 1 RT 1: 3743-7985 bp Neighborhood of RT #1 [3743, 8122] LacI PBP1_GntR RVT-GII GIIM RVT-GII Tra5 Feature: gene Location: 3743-4774 bp Feature: domain Description: LacI Location: 3785-3920 bp Feature: domain Description: LacI Location: 3785-392 0 bp Feature: domain Description: PBP1_GntR Location: 3959-4769 bp Feature: domain Description: PBP1_GntR Location: 3959-4769 bp Feature: gene Location: 4905-5123 bp Feature: gene Location: 5301-6152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5304-5712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5304-5712 bp Feature: domain Description: GIIM Note: maturase Location: 5760-5982 bp Feature: domain Description: GIIM Note: maturase Location: 5760-5982 bp Feature: gene Location: 6125-6559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6317-6533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6317-6533 bp Feature: gene Location: 6728-6925 bp Feature: gene Location: 7301-8122 bp Feature: domain Description: Tra5 Location: 7457-7985 bp Feature: domain Description: Tra5 Location: 7457-7985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacI (pfam00356), PBP1_GntR (cd01575), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)